RNA–Protein interactions for RNA: ENST00000415993.5

HDAC10-203, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-203ENST00000415993 HERC3Q15034 1050 aa17.02■□□□□ 0.32
HDAC10-203ENST00000415993 NAIF1Q69YI7 327 aaPredicted RBP17.02■□□□□ 0.32
HDAC10-203ENST00000415993 SYCE2Q6PIF2 218 aa17.02■□□□□ 0.32
HDAC10-203ENST00000415993 TMEM184AQ6ZMB5 413 aa17.02■□□□□ 0.32
HDAC10-203ENST00000415993 DPPA4Q7L190 304 aa17.02■□□□□ 0.32
HDAC10-203ENST00000415993 MYO1HQ8N1T3 1032 aa17.02■□□□□ 0.32
HDAC10-203ENST00000415993 PDPRQ8NCN5 879 aa17.02■□□□□ 0.32
HDAC10-203ENST00000415993 HGH1Q9BTY7 390 aa17.02■□□□□ 0.32
HDAC10-203ENST00000415993 SPATA16Q9BXB7 569 aa17.02■□□□□ 0.32
HDAC10-203ENST00000415993 RNPEPL1Q9HAU8 725 aa17.02■□□□□ 0.32
HDAC10-203ENST00000415993 EIF2B4Q9UI10 523 aaKnown RBP17.02■□□□□ 0.32
HDAC10-203ENST00000415993 PTGDR2Q9Y5Y4 395 aa17.02■□□□□ 0.32
HDAC10-203ENST00000415993 PIP5K1BO14986 540 aa17.02■□□□□ 0.31
HDAC10-203ENST00000415993 UBDO15205 165 aa17.02■□□□□ 0.31
HDAC10-203ENST00000415993 FFAR2O15552 330 aa17.02■□□□□ 0.31
HDAC10-203ENST00000415993 ESRRBO95718 433 aa17.02■□□□□ 0.31
HDAC10-203ENST00000415993 CCR7P32248 378 aa17.02■□□□□ 0.31
HDAC10-203ENST00000415993 CUL3Q13618 768 aa17.02■□□□□ 0.31
HDAC10-203ENST00000415993 CYLC2Q14093 348 aaPredicted RBP17.02■□□□□ 0.31
HDAC10-203ENST00000415993 PCBP2Q15366 365 aaKnown RBP eCLIP17.02■□□□□ 0.315e-15■■■■□ 26.6
HDAC10-203ENST00000415993 CRY1Q16526 586 aa17.02■□□□□ 0.31
HDAC10-203ENST00000415993 PHKG1Q16816 387 aa17.02■□□□□ 0.31
HDAC10-203ENST00000415993 C18orf21Q32NC0 220 aaPredicted RBP17.02■□□□□ 0.31
HDAC10-203ENST00000415993 PGM2L1Q6PCE3 622 aa17.02■□□□□ 0.31
HDAC10-203ENST00000415993 VITQ6UXI7 678 aa17.02■□□□□ 0.31
HDAC10-203ENST00000415993 SYVN1Q86TM6 617 aa17.02■□□□□ 0.31
HDAC10-203ENST00000415993 KLHL42Q9P2K6 505 aa17.02■□□□□ 0.31
HDAC10-203ENST00000415993 NFKBIL1Q9UBC1 381 aaPredicted RBP17.02■□□□□ 0.31
HDAC10-203ENST00000415993 OARD1Q9Y530 152 aa17.02■□□□□ 0.31
HDAC10-203ENST00000415993 LINC01565O15544 149 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 MLYCDO95822 493 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 MMP12P39900 470 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 METAP1P53582 386 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 FCHO2Q0JRZ9 810 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 PDGFRLQ15198 375 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 HNRNPA1L2Q32P51 320 aaKnown RBP17.01■□□□□ 0.31
HDAC10-203ENST00000415993 C9orf64Q5T6V5 341 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 HENMT1Q5T8I9 393 aaKnown RBP17.01■□□□□ 0.31
HDAC10-203ENST00000415993 FRA10AC1Q70Z53 315 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 PARS2Q7L3T8 475 aaKnown RBP17.01■□□□□ 0.31
HDAC10-203ENST00000415993 TECPR1Q7Z6L1 1165 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 PHYKPLQ8IUZ5 450 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 ENDOVQ8N8Q3 282 aaKnown RBP17.01■□□□□ 0.31
HDAC10-203ENST00000415993 PANX3Q96QZ0 392 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 AKTIPQ9H8T0 292 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 FBRSL1Q9HCM7 1045 aaKnown RBP17.01■□□□□ 0.31
HDAC10-203ENST00000415993 PIKFYVEQ9Y2I7 2098 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 HLA-EP13747 358 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 PTK2BQ14289 1009 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 GRIN2CQ14957 1233 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 EIF4HQ15056 248 aaKnown RBP17.01■□□□□ 0.31
HDAC10-203ENST00000415993 DEFB107AQ8IZN7 70 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 FAM126AQ9BYI3 521 aaPredicted RBP17.01■□□□□ 0.31
HDAC10-203ENST00000415993 NSUN3Q9H649 340 aaKnown RBP17.01■□□□□ 0.31
HDAC10-203ENST00000415993 THG1LQ9NWX6 298 aaKnown RBP17.01■□□□□ 0.31
HDAC10-203ENST00000415993 KCTD5Q9NXV2 234 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 SUN2Q9UH99 717 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 PTBP2Q9UKA9 531 aaKnown RBP17.01■□□□□ 0.31
HDAC10-203ENST00000415993 ST14Q9Y5Y6 855 aa17.01■□□□□ 0.31
HDAC10-203ENST00000415993 MUC22E2RYF6 1773 aaPredicted RBP17.01■□□□□ 0.31
HDAC10-203ENST00000415993 COL4A3Q01955 1670 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 TAPBPO15533 448 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 SPINT1O43278 529 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 CBSLP0DN79 551 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 CBSP35520 551 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 GBX1Q14549 363 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 PREPLQ4J6C6 727 aaPredicted RBP17■□□□□ 0.31
HDAC10-203ENST00000415993 NET1Q7Z628 596 aaPredicted RBP17■□□□□ 0.31
HDAC10-203ENST00000415993 OR56A4Q8NGH8 313 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 MRPL38Q96DV4 380 aaKnown RBP17■□□□□ 0.31
HDAC10-203ENST00000415993 TMEM245Q9H330 911 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 SLC28A3Q9HAS3 691 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 ZFP14Q9HCL3 533 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 MRGBPQ9NV56 204 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 MSRAQ9UJ68 235 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 CDH7Q9ULB5 785 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 PPM1HQ9ULR3 514 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 TIMM22Q9Y584 194 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 FADS2P1A8MWK0 482 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 AIM2O14862 343 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 RAD51BO15315 384 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 SGTAO43765 313 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 ALDOCP09972 364 aaKnown RBP17■□□□□ 0.31
HDAC10-203ENST00000415993 OR56A5P0C7T3 313 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 ATP1B2P14415 290 aaPredicted RBP17■□□□□ 0.31
HDAC10-203ENST00000415993 NFKBIAP25963 317 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 AOAHP28039 575 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 HYAL1Q12794 435 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 SQLEQ14534 574 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 TTLL9Q3SXZ7 439 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 LIPIQ6XZB0 460 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 TRAM1L1Q8N609 369 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 OR52B6Q8NGF0 335 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 CHFRQ96EP1 664 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 ZNF382Q96SR6 550 aa17■□□□□ 0.31
HDAC10-203ENST00000415993 RIOK2Q9BVS4 552 aaKnown RBP17■□□□□ 0.31
HDAC10-203ENST00000415993 TNPO3Q9Y5L0 923 aaKnown RBP17■□□□□ 0.31
HDAC10-203ENST00000415993 KIF26AQ9ULI4 1882 aaPredicted RBP16.99■□□□□ 0.31
HDAC10-203ENST00000415993 ANKRD12Q6UB98 2062 aa16.99■□□□□ 0.31
HDAC10-203ENST00000415993 KPNA3O00505 521 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms