RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 ATP1B2P14415 290 aaPredicted RBP9.89□□□□□ -0.83
TMEM248-202ENST00000413593 XRCC1P18887 633 aaPredicted RBP9.89□□□□□ -0.83
TMEM248-202ENST00000413593 PBLDP30039 288 aaPredicted RBP9.89□□□□□ -0.83
TMEM248-202ENST00000413593 CCKBRP32239 447 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 SLC19A1P41440 591 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 LSSP48449 732 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 NPY2RP49146 381 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 PRLHRP49683 370 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 TERF1P54274 439 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 CRADDP78560 199 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 ZFP36L1Q07352 338 aaKnown RBP9.89□□□□□ -0.83
TMEM248-202ENST00000413593 SQSTM1Q13501 440 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 NFE2L1Q14494 772 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 CLPPQ16740 277 aaPredicted RBP9.89□□□□□ -0.83
TMEM248-202ENST00000413593 MAP9Q49MG5 647 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 ANKRD22Q5VYY1 191 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 LRRC8BQ6P9F7 803 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 AFTPHQ6ULP2 937 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 XKR5Q6UX68 686 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 USP53Q70EK8 1073 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 TMPRSS9Q7Z410 1059 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 SLITRK4Q8IW52 837 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 C17orf53Q8N3J3 647 aaPredicted RBP9.89□□□□□ -0.83
TMEM248-202ENST00000413593 OR2L2Q8NH16 312 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 SH3KBP1Q96B97 665 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 LIN37Q96GY3 246 aaPredicted RBP9.89□□□□□ -0.83
TMEM248-202ENST00000413593 CAPZA3Q96KX2 299 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 LINC00615Q96LM1 132 aaPredicted RBP9.89□□□□□ -0.83
TMEM248-202ENST00000413593 SLC38A3Q99624 504 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 MFRPQ9BY79 579 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 FOXP3Q9BZS1 431 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 DDX47Q9H0S4 455 aaKnown RBP9.89□□□□□ -0.83
TMEM248-202ENST00000413593 STN1Q9H668 368 aaKnown RBP9.89□□□□□ -0.83
TMEM248-202ENST00000413593 POLR1BQ9H9Y6 1135 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 TREX1Q9NSU2 369 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 SYBUQ9NX95 663 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 ZNF624Q9P2J8 865 aaPredicted RBP9.89□□□□□ -0.83
TMEM248-202ENST00000413593 ZMIZ1Q9ULJ6 1067 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 WDR37Q9Y2I8 494 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 PLXNB3Q9ULL4 1909 aa9.89□□□□□ -0.83
TMEM248-202ENST00000413593 CCDC187A0A096LP49 1063 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 PMS2P1A4D2B8 440 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 LILRA5A6NI73 299 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 OR52A4PA6NMU1 304 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 BRINP1O60477 761 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 AVILO75366 819 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 DXOO77932 396 aaKnown RBP9.88□□□□□ -0.83
TMEM248-202ENST00000413593 GOT2P00505 430 aaKnown RBP9.88□□□□□ -0.83
TMEM248-202ENST00000413593 VIPP01282 170 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 MGAT1P26572 445 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 CSF2RBP32927 897 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 HALP42357 657 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 EPHA4P54764 986 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 INHBCP55103 352 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 GABREP78334 506 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 PRAMEP78395 509 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 GPLD1P80108 840 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 SARNPP82979 210 aaKnown RBP9.88□□□□□ -0.83
TMEM248-202ENST00000413593 CFHR1Q03591 330 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 ITIH4Q14624 930 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 CLCA4Q14CN2 919 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 C3orf38Q5JPI3 329 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 NKAIN2Q5VXU1 208 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 METRNLQ641Q3 311 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 PACS1Q6VY07 963 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 ZNF574Q6ZN55 896 aaPredicted RBP9.88□□□□□ -0.83
TMEM248-202ENST00000413593 PIM3Q86V86 326 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 CAND1Q86VP6 1230 aaKnown RBP9.88□□□□□ -0.83
TMEM248-202ENST00000413593 TRIM48Q8IWZ4 208 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 CLDN19Q8N6F1 224 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 MCUQ8NE86 351 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 OR6P1Q8NGX9 317 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 OR4L1Q8NH43 312 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 OR10G6Q8NH81 332 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 WDR36Q8NI36 951 aaKnown RBP9.88□□□□□ -0.83
TMEM248-202ENST00000413593 SLCO2A1Q92959 643 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.88□□□□□ -0.83
TMEM248-202ENST00000413593 SGSM3Q96HU1 749 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 TMEM74Q96NL1 305 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 NUDT22Q9BRQ3 303 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 KIFC1Q9BW19 673 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.88□□□□□ -0.83
TMEM248-202ENST00000413593 STRADBQ9C0K7 418 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 UCK1Q9HA47 277 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 EPB41L5Q9HCM4 733 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 POT1Q9NUX5 634 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 FAM8A1Q9UBU6 413 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 PCYOX1Q9UHG3 505 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 PSMD13Q9UNM6 376 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 SATB2Q9UPW6 733 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 APC2O95996 2303 aa9.88□□□□□ -0.83
TMEM248-202ENST00000413593 COL27A1Q8IZC6 1860 aaPredicted RBP9.87□□□□□ -0.83
TMEM248-202ENST00000413593 RP1P56715 2156 aa9.87□□□□□ -0.83
TMEM248-202ENST00000413593 PRAMEF33A0A0G2JMD5 474 aa9.87□□□□□ -0.83
TMEM248-202ENST00000413593 C17orf113A0A1B0GUU1 675 aa9.87□□□□□ -0.83
TMEM248-202ENST00000413593 DUX1O43812 170 aa9.87□□□□□ -0.83
TMEM248-202ENST00000413593 AP2A2O94973 939 aa9.87□□□□□ -0.83
TMEM248-202ENST00000413593 MLNP12872 115 aa9.87□□□□□ -0.83
TMEM248-202ENST00000413593 HOXB3P14651 431 aaPredicted RBP9.87□□□□□ -0.83
TMEM248-202ENST00000413593 NMBRP28336 390 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms