RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ZNF547Q8IVP9 402 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 REXO1L1PQ8IX06 675 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 RASGEF1AQ8N9B8 481 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 MCUQ8NE86 351 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 PPHLN1Q8NEY8 458 aaKnown RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 OR4L1Q8NH43 312 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 OR8K5Q8NH50 307 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 HM13Q8TCT9 377 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 SLC37A2Q8TED4 501 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 UBXN4Q92575 508 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 SLCO2A1Q92959 643 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 GORASP1Q9BQQ3 440 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 CARD6Q9BX69 1037 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 MVB12BQ9H7P6 319 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 XAB2Q9HCS7 855 aaKnown RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 BPIFA1Q9NP55 256 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 ASCL3Q9NQ33 180 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 SEMA5BQ9P283 1151 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 POLG2Q9UHN1 485 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 SATB2Q9UPW6 733 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 ST14Q9Y5Y6 855 aa6.28□□□□□ -1.4
USP54-202ENST00000413442 OAS3Q9Y6K5 1087 aaKnown RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 COL27A1Q8IZC6 1860 aaPredicted RBP6.28□□□□□ -1.4
USP54-202ENST00000413442 ADAMTS20P59510 1910 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 IGHV5-10-1A0A0J9YXX1 117 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 UBA6A0AVT1 1052 aaPredicted RBP6.27□□□□□ -1.41
USP54-202ENST00000413442 PDZK1P1A8MUH7 402 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 CCDC188H7C350 402 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 IFRD1O00458 451 aaPredicted RBP6.27□□□□□ -1.41
USP54-202ENST00000413442 GAPDHSO14556 408 aaPredicted RBP6.27□□□□□ -1.41
USP54-202ENST00000413442 UGT1A9O60656 530 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 TNFSF15O95150 251 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 FKBP9O95302 570 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 MT-ND3P03897 115 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 RPN2P04844 631 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 CELA2BP08218 269 aaPredicted RBP6.27□□□□□ -1.41
USP54-202ENST00000413442 CD63P08962 238 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 SLC35G4P0C7Q5 338 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 MSL3P1P0C860 447 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 THRAP10827 490 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 LIPCP11150 499 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 SFTPCP11686 197 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 UGT1A6P19224 532 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 UGT1A1P22309 533 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 UGT1A4P22310 534 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 MC4RP32245 332 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 UGT1A3P35503 534 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 SLC19A1P41440 591 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 PAFAH1B1P43034 410 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 ABCG1P45844 678 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 TMPRSS3P57727 454 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 OR1D5P58170 312 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 PRAMEP78395 509 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 MC2RQ01718 297 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 RHDQ02161 417 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 CCDC173Q0VFZ6 552 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 CBLBQ13191 982 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 MAP7Q14244 749 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 SIX1Q15475 284 aaPredicted RBP6.27□□□□□ -1.41
USP54-202ENST00000413442 CRTC2Q53ET0 693 aaPredicted RBP6.27□□□□□ -1.41
USP54-202ENST00000413442 FASTKD1Q53R41 847 aaKnown RBP6.27□□□□□ -1.41
USP54-202ENST00000413442 ZRANB3Q5FWF4 1079 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 C3orf38Q5JPI3 329 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 FNBP1LQ5T0N5 605 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 DCAF12Q5T6F0 453 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 RNF187Q5TA31 235 aaPredicted RBP6.27□□□□□ -1.41
USP54-202ENST00000413442 MRNIPQ6NTE8 343 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 AFTPHQ6ULP2 937 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 FAM151BQ6UXP7 276 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 CEACAM20Q6UY09 585 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 TAS2R42Q7RTR8 314 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 ZSCAN1Q8NBB4 408 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 MDM1Q8TC05 714 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 CALML6Q8TD86 181 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 MAGEC3Q8TD91 643 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 C1orf54Q8WWF1 131 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 ASZ1Q8WWH4 475 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 SEC14L1Q92503 715 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 MAGOHBQ96A72 148 aaKnown RBP6.27□□□□□ -1.41
USP54-202ENST00000413442 ATXN7L3BQ96GX2 97 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 PRR11Q96HE9 360 aaPredicted RBP6.27□□□□□ -1.41
USP54-202ENST00000413442 SMIM14Q96QK8 99 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 PANX3Q96QZ0 392 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 KIFC1Q9BW19 673 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 CHRNA10Q9GZZ6 450 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 OSGEPL1Q9H4B0 414 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 TFB2MQ9H5Q4 396 aaKnown RBP6.27□□□□□ -1.41
USP54-202ENST00000413442 UGT1A7Q9HAW7 530 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 UGT1A10Q9HAW8 530 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 UGT1A8Q9HAW9 530 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 EPB41L5Q9HCM4 733 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 LATS2Q9NRM7 1088 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 ZNF624Q9P2J8 865 aaPredicted RBP6.27□□□□□ -1.41
USP54-202ENST00000413442 KLHL42Q9P2K6 505 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 SLC23A2Q9UGH3 650 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 FKBPLQ9UIM3 349 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 RABGEF1Q9UJ41 708 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 TMPRSS11EQ9UL52 423 aa6.27□□□□□ -1.41
USP54-202ENST00000413442 SNX12Q9UMY4 172 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms