RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 DUSP4Q13115 394 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 GRTP1Q5TC63 336 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 AGAP6Q5VW22 663 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 MZT2AQ6P582 158 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 COMMD7Q86VX2 200 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 PLCZ1Q86YW0 608 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 MCOLN3Q8TDD5 553 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 AGAP4Q96P64 663 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 C12orf65Q9H3J6 166 aaKnown RBP8.43□□□□□ -1.06
PBRM1-209ENST00000412587 MUC13Q9H3R2 512 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 ACTR8Q9H981 624 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 DYRK1BQ9Y463 629 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 CCDC154A6NI56 674 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 ZNF879B4DU55 563 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 IFRD1O00458 451 aaPredicted RBP8.43□□□□□ -1.06
PBRM1-209ENST00000412587 RNASEH2AO75792 299 aaKnown RBP8.43□□□□□ -1.06
PBRM1-209ENST00000412587 BCAS2O75934 225 aaPredicted RBP8.43□□□□□ -1.06
PBRM1-209ENST00000412587 APOC1P02654 83 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 CYP2A6P11509 494 aaPredicted RBP8.43□□□□□ -1.06
PBRM1-209ENST00000412587 PSMB4P28070 264 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 CYP4F8P98187 520 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 PTPN20Q4JDL3 420 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 ZNF605Q86T29 641 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 CADM3Q8N126 398 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 Q8N9G6 341 aaPredicted RBP8.43□□□□□ -1.06
PBRM1-209ENST00000412587 TMEM159Q96B96 161 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 TXNDC15Q96J42 360 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 KIFC1Q9BW19 673 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 UCK2Q9BZX2 261 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 CBY1Q9Y3M2 126 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 PDE4DIPQ5VU43 2346 aa8.43□□□□□ -1.06
PBRM1-209ENST00000412587 FAM208AQ9UK61 1670 aaKnown RBP8.42□□□□□ -1.06
PBRM1-209ENST00000412587 A6NL46 340 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 CILPO75339 1184 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 GLUD1P00367 558 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 ERBB2P04626 1255 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 PROS1P07225 676 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 UMPSP11172 480 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 GOT1P17174 413 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 AZGP1P25311 298 aaKnown RBP8.42□□□□□ -1.06
PBRM1-209ENST00000412587 SOAT1P35610 550 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 CBX5P45973 191 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 PEX6Q13608 980 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 TARBP2Q15633 366 aaKnown RBP8.42□□□□□ -1.06
PBRM1-209ENST00000412587 ANKRD26P1Q6NSI1 321 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 FBXL19Q6PCT2 694 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 SPESP1Q6UW49 350 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 SNX20Q7Z614 316 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 OR10T2Q8NGX3 314 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 GPR152Q8TDT2 470 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 CNOT6Q9ULM6 557 aaKnown RBP8.42□□□□□ -1.06
PBRM1-209ENST00000412587 CLUHO75153 1309 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 A0A096LPK6 155 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 SOBPA7XYQ1 873 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 WRBO00258 174 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 MSI1O43347 362 aaKnown RBP8.42□□□□□ -1.06
PBRM1-209ENST00000412587 LIASO43766 372 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 KLHL18O94889 574 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 C22orf31O95567 290 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 HMGN1P05114 100 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 CYP3A5P20815 502 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 RORAP35398 523 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 IDH3AP50213 366 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 CAMK1Q14012 370 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 SLC9A5Q14940 896 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 ACOX1Q15067 660 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 CDK10Q15131 360 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 ZYG11AQ6WRX3 759 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 TRMT11Q7Z4G4 463 aaKnown RBP8.42□□□□□ -1.06
PBRM1-209ENST00000412587 AADATQ8N5Z0 425 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 ATAD1Q8NBU5 361 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 SLC9A6Q92581 669 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 FCGR1BQ92637 280 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 CENPIQ92674 756 aaPredicted RBP8.42□□□□□ -1.06
PBRM1-209ENST00000412587 RNFT2Q96EX2 444 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 GFM1Q96RP9 751 aaKnown RBP8.42□□□□□ -1.06
PBRM1-209ENST00000412587 HOPXQ9BPY8 73 aaPredicted RBP8.42□□□□□ -1.06
PBRM1-209ENST00000412587 LPIN3Q9BQK8 851 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 NTPCRQ9BSD7 190 aaKnown RBP8.42□□□□□ -1.06
PBRM1-209ENST00000412587 MAFFQ9ULX9 164 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 SNED1Q8TER0 1413 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 FAM149AA5PLN7 773 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 MUSKO15146 869 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 PGLSO95336 258 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 NPR2P20594 1047 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 EPHA3P29320 983 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 ATP6V1E1P36543 226 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 PMS2P3Q13401 168 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 BOP1Q14137 746 aaKnown RBP8.42□□□□□ -1.06
PBRM1-209ENST00000412587 CCL14Q16627 93 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 ATP6AP1LQ52LC2 224 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 BRMS1LQ5PSV4 323 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 C11orf88Q6PI97 169 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 SLC22A9Q8IVM8 553 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 SRFBP1Q8NEF9 429 aaKnown RBP8.42□□□□□ -1.06
PBRM1-209ENST00000412587 JOSD2Q8TAC2 188 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 EBF4Q9BQW3 602 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 TXLNGYQ9BZA5 131 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 IL22Q9GZX6 179 aa8.42□□□□□ -1.06
PBRM1-209ENST00000412587 CD93Q9NPY3 652 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms