RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 USP17L15C9J2P7 530 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 USP17L12C9JPN9 530 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 USP17L11C9JVI0 530 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 USP17L21D6R901 530 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 USP17L18D6R9N7 530 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 USP17L22D6RA61 530 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 USP17L19D6RCP7 530 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 USP17L20D6RJB6 530 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 H0YCG3 227 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 J3KRW8 73 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 HCRTR2O43614 444 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 KLHL18O94889 574 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 CELF2O95319 508 aaKnown RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 CXCL14O95715 111 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 PGK1P00558 417 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 CNPP09543 421 aaKnown RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 CLUP10909 449 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 STMN1P16949 149 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 NDUFV2P19404 249 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 POU1F1P28069 291 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 DNA2P51530 1060 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 CDH6P55285 790 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ZNF45Q02386 682 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 USP17L24Q0WX57 530 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 TUBB3Q13509 450 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 AQP6Q13520 282 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ZNF174Q15697 407 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 BMT2Q1RMZ1 405 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.18□□□□□ -1.58
HERC4-205ENST00000412272 LAMTOR1Q6IAA8 161 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 RAB12Q6IQ22 244 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 RICTORQ6R327 1708 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ETV3LQ6ZN32 361 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 DENND5BQ6ZUT9 1274 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 NUDT18Q6ZVK8 323 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ARCQ7LC44 396 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 EFL1Q7Z2Z2 1120 aaKnown RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 GALNT10Q86SR1 603 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 HORMAD1Q86X24 394 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ARHGEF19Q8IW93 802 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 LURAP1Q96LR2 239 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 MAP3K3Q99759 626 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 RTKNQ9BST9 563 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 HDHD5Q9BXW7 423 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 MS4A7Q9GZW8 240 aaPredicted RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 OSBPL2Q9H1P3 480 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ADAMTS10Q9H324 1103 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 SIX2Q9NPC8 291 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ARMCX1Q9P291 453 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 SLC23A1Q9UHI7 598 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 GPN3Q9UHW5 284 aaPredicted RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 PTPN22Q9Y2R2 807 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 DDX60LQ5H9U9 1706 aaKnown RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 C9orf170A2RU37 121 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 TMEM88BA6NKF7 163 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 TMEM210A6NLX4 147 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 GPR25O00155 361 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 TFECO14948 347 aaPredicted RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 AKR7A2O43488 359 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 CHMP2AO43633 222 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 TLL1O43897 1013 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 NOL3O60936 208 aaKnown RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 DDAH1O94760 285 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ACSL3O95573 720 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 OPN1MWP04001 364 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 HCKP08631 526 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 TRAPPC2P0DI81 140 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 TRAPPC2BP0DI82 140 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 OPN1MW2P0DN77 364 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 OPN1MW3P0DN78 364 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 MCF2P10911 925 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ATF3P18847 181 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 DDX6P26196 483 aaKnown RBP eCLIP5.18□□□□□ -1.58
HERC4-205ENST00000412272 CDH13P55290 713 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ZNF280AP59817 542 aaPredicted RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 AP1S1P61966 158 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 FOXO4P98177 505 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 SEMA3BQ13214 749 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 SLC9A5Q14940 896 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 DUOXA2Q1HG44 320 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 EPC2Q52LR7 807 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 STEAP3Q658P3 488 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ZNF530Q6P9A1 599 aaPredicted RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 COMMD7Q86VX2 200 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ZFAND4Q86XD8 727 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 LILRA2Q8N149 483 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 C10orf53Q8N6V4 93 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 PACRGLQ8N7B6 248 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 NANOGP1Q8N7R0 232 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 PNMA1Q8ND90 353 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 LNX1Q8TBB1 728 aaPredicted RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 MAGEB10Q96LZ2 347 aaPredicted RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 FCRL4Q96PJ5 515 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.18□□□□□ -1.58
HERC4-205ENST00000412272 FAM96AQ9H5X1 160 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 GPRC5CQ9NQ84 441 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 NIT2Q9NQR4 276 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 PLCXD1Q9NUJ7 323 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 FBXL12Q9NXK8 326 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 MORF4L1Q9UBU8 362 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms