RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 HYAL1Q12794 435 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 CYLC2Q14093 348 aaPredicted RBP18.68■□□□□ 0.58
USP39-202ENST00000409025 RBBP7Q16576 425 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 SNX32Q86XE0 403 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 TWIST2Q8WVJ9 160 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 SCAMP4Q969E2 229 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 EIF2B4Q9UI10 523 aaKnown RBP18.68■□□□□ 0.58
USP39-202ENST00000409025 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.68■□□□□ 0.58
USP39-202ENST00000409025 KIF26AQ9ULI4 1882 aaPredicted RBP18.68■□□□□ 0.58
USP39-202ENST00000409025 CFAP99D6REC4 459 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 FFAR2O15552 330 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 HLA-EP13747 358 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 ATP1B2P14415 290 aaPredicted RBP18.68■□□□□ 0.58
USP39-202ENST00000409025 MMP12P39900 470 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 FCHO2Q0JRZ9 810 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 RUNX3Q13761 415 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 PCBP2Q15366 365 aaKnown RBP eCLIP18.68■□□□□ 0.58
USP39-202ENST00000409025 PPP1R3AQ16821 1122 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 ULK2Q8IYT8 1036 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 TERB1Q8NA31 727 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 PDPRQ8NCN5 879 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 TMIEQ8NEW7 156 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 UCMAQ8WVF2 138 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 ZSCAN5AQ9BUG6 496 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 NSUN3Q9H649 340 aaKnown RBP18.68■□□□□ 0.58
USP39-202ENST00000409025 PIKFYVEQ9Y2I7 2098 aa18.68■□□□□ 0.58
USP39-202ENST00000409025 EIF3FO00303 357 aaPredicted RBP18.67■□□□□ 0.58
USP39-202ENST00000409025 E2F3O00716 465 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 CHUKO15111 745 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 CIB2O75838 187 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 ESRRBO95718 433 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 ELFN1P0C7U0 828 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 FOXA1P55317 472 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 SQLEQ14534 574 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 ZNF234Q14588 700 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 ZNF284Q2VY69 593 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 C9orf64Q5T6V5 341 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 CYHR1Q6ZMK1 362 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 LARP4Q71RC2 724 aaKnown RBP eCLIP18.67■□□□□ 0.58
USP39-202ENST00000409025 EFL1Q7Z2Z2 1120 aaKnown RBP18.67■□□□□ 0.58
USP39-202ENST00000409025 ESAMQ96AP7 390 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 TIFAQ96CG3 184 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 KCNA7Q96RP8 456 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 RIOK2Q9BVS4 552 aaKnown RBP18.67■□□□□ 0.58
USP39-202ENST00000409025 ADAMTS6Q9UKP5 1117 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 SARDHQ9UL12 918 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 PLXNA2O75051 1894 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 KIAA1549LQ6ZVL6 1849 aa18.67■□□□□ 0.58
USP39-202ENST00000409025 TBC1D3BA6NDS4 549 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 PIP5K1BO14986 540 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 ENO3P13929 434 aaPredicted RBP18.66■□□□□ 0.58
USP39-202ENST00000409025 ITGAXP20702 1163 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 CCR7P32248 378 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 CDC16Q13042 620 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 ATAT1Q5SQI0 421 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 HENMT1Q5T8I9 393 aaKnown RBP18.66■□□□□ 0.58
USP39-202ENST00000409025 C6orf163Q5TEZ5 329 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 SERPINA13PQ6UXR4 307 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 LIPIQ6XZB0 460 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 DET1Q7L5Y6 550 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 TECPR1Q7Z6L1 1165 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 SYVN1Q86TM6 617 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 DDIASQ8IXT1 998 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 PIP4K2CQ8TBX8 421 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 NUSAP1Q9BXS6 441 aaKnown RBP18.66■□□□□ 0.58
USP39-202ENST00000409025 MUC22E2RYF6 1773 aaPredicted RBP18.66■□□□□ 0.58
USP39-202ENST00000409025 ATP6AP2A0A1C7CYW4 349 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 PSMD11O00231 422 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 ENTPD5O75356 428 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 ATP6AP2O75787 350 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 CHEK2O96017 543 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 VCLP18206 1134 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 MSH3P20585 1137 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 ITGB7P26010 798 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 GRM2Q14416 872 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 ELAVL3Q14576 367 aaKnown RBP18.66■□□□□ 0.58
USP39-202ENST00000409025 ACOX1Q15067 660 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 GPRIN3Q6ZVF9 776 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 NRSN1Q8IZ57 195 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 C3orf30Q96M34 536 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 ZNF382Q96SR6 550 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 EGFL8Q99944 293 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 PPM1HQ9ULR3 514 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 ASB1Q9Y576 335 aa18.66■□□□□ 0.58
USP39-202ENST00000409025 ANKRD12Q6UB98 2062 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 A0A1B0GTL3 188 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 PEX11AO75192 247 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 VPS4BO75351 444 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 AP2A2O94973 939 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 GUCA1CO95843 209 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 LMNAP02545 664 aaKnown RBP18.65■□□□□ 0.58
USP39-202ENST00000409025 UROSP10746 265 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 GM2AP17900 193 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 AOAHP28039 575 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 GJA4P35212 333 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 OPRD1P41143 372 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 PKNOX1P55347 436 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 GRIN2CQ14957 1233 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 KPNB1Q14974 876 aaKnown RBP18.65■□□□□ 0.58
USP39-202ENST00000409025 FAM219BQ5XKK7 198 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms