RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 FNDC3AQ9Y2H6 1198 aaKnown RBP9.67□□□□□ -0.86
POLR1A-202ENST00000409024 TNPO3Q9Y5L0 923 aaKnown RBP9.67□□□□□ -0.86
POLR1A-202ENST00000409024 PIAS3Q9Y6X2 628 aa9.67□□□□□ -0.86
POLR1A-202ENST00000409024 ZFHX4Q86UP3 3567 aa9.67□□□□□ -0.86
POLR1A-202ENST00000409024 FASNP49327 2511 aaKnown RBP9.66□□□□□ -0.86
POLR1A-202ENST00000409024 A0A0U1RQS6 177 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 A8MT66 165 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 NEMP1O14524 444 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 SLC16A5O15375 505 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 SPINT1O43278 529 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 VEGFDO43915 354 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 LZTS3O60299 673 aaPredicted RBP9.66□□□□□ -0.86
POLR1A-202ENST00000409024 ATP5HO75947 161 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 RECQL5O94762 991 aaPredicted RBP9.66□□□□□ -0.86
POLR1A-202ENST00000409024 LMNAP02545 664 aaKnown RBP9.66□□□□□ -0.86
POLR1A-202ENST00000409024 ENO2P09104 434 aaPredicted RBP9.66□□□□□ -0.86
POLR1A-202ENST00000409024 SRFP11831 508 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 C6P13671 934 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 TIE1P35590 1138 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 ETV3P41162 512 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 PSMD8P48556 350 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 NAGLUP54802 743 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 ALDH18A1P54886 795 aaKnown RBP9.66□□□□□ -0.86
POLR1A-202ENST00000409024 RPS14P62263 151 aaKnown RBP9.66□□□□□ -0.86
POLR1A-202ENST00000409024 HERVK_113P63132 956 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 PLOD1Q02809 727 aaPredicted RBP9.66□□□□□ -0.86
POLR1A-202ENST00000409024 IFT88Q13099 833 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 GBX1Q14549 363 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 ST3GAL2Q16842 350 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 MAP7D1Q3KQU3 841 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 LACTB2Q53H82 288 aaPredicted RBP9.66□□□□□ -0.86
POLR1A-202ENST00000409024 PIP5KL1Q5T9C9 394 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 FAM91A1Q658Y4 838 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 NAIF1Q69YI7 327 aaPredicted RBP9.66□□□□□ -0.86
POLR1A-202ENST00000409024 USP30Q70CQ3 517 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 KBTBD6Q86V97 674 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 PHYKPLQ8IUZ5 450 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 SFTPA1Q8IWL2 248 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 SYNPOQ8N3V7 929 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 ZBTB2Q8N680 514 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 SIDT2Q8NBJ9 832 aaKnown RBP9.66□□□□□ -0.86
POLR1A-202ENST00000409024 TXNDC5Q8NBS9 432 aaKnown RBP9.66□□□□□ -0.86
POLR1A-202ENST00000409024 CCT6BQ92526 530 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 PTERQ96BW5 349 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 NUS1Q96E22 293 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 LINGO1Q96FE5 620 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 LRRC37BQ96QE4 947 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 ACOX2Q99424 681 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 SORT1Q99523 831 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 RIOK2Q9BVS4 552 aaKnown RBP9.66□□□□□ -0.86
POLR1A-202ENST00000409024 BOCQ9BWV1 1114 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 ERVK-6Q9BXR3 956 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 NPHS2Q9NP85 383 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 DLL3Q9NYJ7 618 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 NUDT4Q9NZJ9 180 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 FZD4Q9ULV1 537 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 RNF112Q9ULX5 631 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 DNAJC16Q9Y2G8 782 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 STK38LQ9Y2H1 464 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 FAM208BQ5VWN6 2430 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 FRYLO94915 3013 aa9.66□□□□□ -0.86
POLR1A-202ENST00000409024 COL4A2P08572 1712 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 OTOGLQ3ZCN5 2332 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 C17orf113A0A1B0GUU1 675 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 GPR89AB7ZAQ6 455 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 RAD51BO15315 384 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 MID1O15344 667 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 ITM2AO43736 263 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 NUAK1O60285 661 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 HNRNPCL1O60812 293 aaKnown RBP9.65□□□□□ -0.86
POLR1A-202ENST00000409024 CCDC22O60826 627 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 TM7SF2O76062 418 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 TRIM16O95361 564 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 DNTTP04053 509 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 C8GP07360 202 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 GPR89BP0CG08 455 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 MTHFD2P13995 350 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 GM2AP17900 193 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 SP100P23497 879 aaPredicted RBP9.65□□□□□ -0.86
POLR1A-202ENST00000409024 AOAHP28039 575 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 AKT1P31749 480 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 DRD3P35462 400 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 SOX9P48436 509 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 RPL14P50914 215 aaKnown RBP9.65□□□□□ -0.86
POLR1A-202ENST00000409024 COPAP53621 1224 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 HNRNPH2P55795 449 aaKnown RBP9.65□□□□□ -0.86
POLR1A-202ENST00000409024 CDKL1Q00532 357 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 B4GALNT1Q00973 533 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 CNTN1Q12860 1018 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 CDC16Q13042 620 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 SP140Q13342 867 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 TDGQ13569 410 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 TBCCQ15814 346 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 BCL7AQ4VC05 210 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 ZNF678Q5SXM1 525 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 AGBL4Q5VU57 503 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 METTL21CQ5VZV1 264 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 CES4AQ5XG92 561 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 KIAA1161Q6NSJ0 714 aa9.65□□□□□ -0.86
POLR1A-202ENST00000409024 FOXR1Q6PIV2 292 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms