RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 SAMD4BQ5PRF9 694 aaKnown RBP16.36■□□□□ 0.21
PIKFYVE-204ENST00000407449 ZDHHC20Q5W0Z9 365 aa16.36■□□□□ 0.21
PIKFYVE-204ENST00000407449 GOLGA7Q7Z5G4 137 aa16.36■□□□□ 0.21
PIKFYVE-204ENST00000407449 PDSS2Q86YH6 399 aa16.36■□□□□ 0.21
PIKFYVE-204ENST00000407449 CHCHD4Q8N4Q1 142 aa16.36■□□□□ 0.21
PIKFYVE-204ENST00000407449 LATS2Q9NRM7 1088 aa16.36■□□□□ 0.21
PIKFYVE-204ENST00000407449 SPATS2LQ9NUQ6 558 aaKnown RBP16.36■□□□□ 0.21
PIKFYVE-204ENST00000407449 AIG1Q9NVV5 245 aa16.36■□□□□ 0.21
PIKFYVE-204ENST00000407449 TMEM181Q9P2C4 612 aa16.36■□□□□ 0.21
PIKFYVE-204ENST00000407449 EPS15L1Q9UBC2 864 aa16.36■□□□□ 0.21
PIKFYVE-204ENST00000407449 TSR3Q9UJK0 312 aaKnown RBP16.36■□□□□ 0.21
PIKFYVE-204ENST00000407449 GPR45Q9Y5Y3 372 aa16.36■□□□□ 0.21
PIKFYVE-204ENST00000407449 SLC4A7Q9Y6M7 1214 aa16.36■□□□□ 0.21
PIKFYVE-204ENST00000407449 WASH3PC4AMC7 463 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 UGT2B4P06133 528 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 TYRP14679 529 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 LHCGRP22888 699 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 MSX2P35548 267 aaPredicted RBP16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 NSG1P42857 185 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 NME5P56597 212 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 ERVPABLB-1P60509 514 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 TRAP1Q12931 704 aaKnown RBP16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 TRIM25Q14258 630 aaKnown RBP16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 SLC5A9Q2M3M2 681 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 COQ5Q5HYK3 327 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 LPCAT4Q643R3 524 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 PRMT9Q6P2P2 845 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 TMEM126BQ8IUX1 230 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 PLCD3Q8N3E9 789 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 SPPL3Q8TCT6 385 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 TSPEARQ8WU66 669 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 ULK4Q96C45 1275 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 NOL11Q9H8H0 719 aaKnown RBP16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 KLHL42Q9P2K6 505 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 PTBP2Q9UKA9 531 aaKnown RBP16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 ANKRD12Q6UB98 2062 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 NOTCH4Q99466 2003 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 ANGPT2O15123 496 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 C1SP09871 688 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 TCF3P15923 654 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 CAPN3P20807 821 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 PEX2P28328 305 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 PTSQ03393 145 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 GTF2H2Q13888 395 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 TMEM240Q5SV17 173 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 OGFRL1Q5TC84 451 aaPredicted RBP16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 GTF2H2CQ6P1K8 395 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 Q6ZVU0 165 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 RETREG3Q86VR2 466 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 PLPP6Q8IY26 295 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 CDYL2Q8N8U2 506 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 OR52B6Q8NGF0 335 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 NAT14Q8WUY8 206 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 BADQ92934 168 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 PBXIP1Q96AQ6 731 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 OTUB2Q96DC9 234 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 COPS8Q99627 209 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 KCTD5Q9NXV2 234 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 CD300AQ9UGN4 299 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 SLCO3A1Q9UIG8 710 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 ST14Q9Y5Y6 855 aa16.35■□□□□ 0.21
PIKFYVE-204ENST00000407449 TLL1O43897 1013 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 XYLBO75191 536 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 HNRNPA1P09651 372 aaKnown RBP eCLIP16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 CBSLP0DN79 551 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 TCN1P20061 433 aaPredicted RBP16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 CBSP35520 551 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 POLR2LP62875 67 aaKnown RBP16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 ERVK-8P63133 956 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 SEMG2Q02383 582 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 UBE3AQ05086 875 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 ADGRE1Q14246 886 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 PDCD4Q53EL6 469 aaKnown RBP16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 PRSS36Q5K4E3 855 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 LETMD1Q6P1Q0 360 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 PSRC1Q6PGN9 363 aaPredicted RBP16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 BLOC1S3Q6QNY0 202 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 LAYNQ6UX15 382 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 GDPD4Q6W3E5 623 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 KIAA0907Q7Z7F0 614 aaPredicted RBP16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 ADIPOR2Q86V24 386 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 CHST14Q8NCH0 376 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 FAM156AQ8NDB6 213 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 UBTD2Q8WUN7 234 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 ACOX2Q99424 681 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 HOPXQ9BPY8 73 aaPredicted RBP16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 GPATCH1Q9BRR8 931 aaKnown RBP16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 BRINP2Q9C0B6 783 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 BRD9Q9H8M2 597 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 MARK1Q9P0L2 795 aa16.34■□□□□ 0.21
PIKFYVE-204ENST00000407449 IGLV3-16A0A075B6K0 115 aa16.33■□□□□ 0.21
PIKFYVE-204ENST00000407449 PRSS51A0A1B0GVH4 220 aa16.33■□□□□ 0.21
PIKFYVE-204ENST00000407449 OR7A17O14581 309 aa16.33■□□□□ 0.21
PIKFYVE-204ENST00000407449 OTCP00480 354 aa16.33■□□□□ 0.21
PIKFYVE-204ENST00000407449 C8BP07358 591 aa16.33■□□□□ 0.21
PIKFYVE-204ENST00000407449 VCLP18206 1134 aa16.33■□□□□ 0.21
PIKFYVE-204ENST00000407449 RECQLP46063 649 aaPredicted RBP16.33■□□□□ 0.21
PIKFYVE-204ENST00000407449 SLC7A2P52569 658 aa16.33■□□□□ 0.21
PIKFYVE-204ENST00000407449 DIO3P55073 304 aa16.33■□□□□ 0.21
PIKFYVE-204ENST00000407449 RALGDSQ12967 914 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms