RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 MROH9Q5TGP6 573 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 HECTD2Q5U5R9 776 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 ZNF549Q6P9A3 640 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 SLC23A3Q6PIS1 610 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 IL27RAQ6UWB1 636 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 LRIG3Q6UXM1 1119 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 AMZ2Q86W34 360 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 IQCKQ8N0W5 287 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 KRT222Q8N1A0 295 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 RIBC1Q8N443 379 aaPredicted RBP15.5■□□□□ 0.07
CDPF1-204ENST00000404744 EPS8L3Q8TE67 593 aaKnown RBP15.5■□□□□ 0.07
CDPF1-204ENST00000404744 KCNJ9Q92806 393 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 TSPAN17Q96FV3 270 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 ERVMER34-1Q9H9K5 563 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 SPATS2LQ9NUQ6 558 aaKnown RBP15.5■□□□□ 0.07
CDPF1-204ENST00000404744 FAM86C1Q9NVL1 165 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 APOBEC3BQ9UH17 382 aaKnown RBP15.5■□□□□ 0.07
CDPF1-204ENST00000404744 TBK1Q9UHD2 729 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 SLC39A10Q9ULF5 831 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 MTO1Q9Y2Z2 717 aaKnown RBP15.5■□□□□ 0.07
CDPF1-204ENST00000404744 SNX11Q9Y5W9 270 aa15.5■□□□□ 0.07
CDPF1-204ENST00000404744 SCAMP1O15126 338 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 NIPSNAP2O75323 286 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 FUCA1P04066 466 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 CSF2P04141 144 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 SNRPAP09012 282 aaKnown RBP15.49■□□□□ 0.07
CDPF1-204ENST00000404744 ACP5P13686 325 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 SKIV2L2P42285 1042 aaKnown RBP15.49■□□□□ 0.07
CDPF1-204ENST00000404744 CTSKP43235 329 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 ARRB1P49407 418 aaPredicted RBP15.49■□□□□ 0.07
CDPF1-204ENST00000404744 HNRNPKP61978 463 aaKnown RBP eCLIP15.49■□□□□ 0.07
CDPF1-204ENST00000404744 POU4F1Q01851 419 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 PDAP1Q13442 181 aaKnown RBP15.49■□□□□ 0.07
CDPF1-204ENST00000404744 BMPR2Q13873 1038 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 LRP8Q14114 963 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 TMED2Q15363 201 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 KRT71Q3SY84 523 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 SYTL3Q4VX76 610 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 CEP85LQ5SZL2 805 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 OTOAQ7RTW8 1153 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 TDRPQ86YL5 185 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 ZNF547Q8IVP9 402 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 ELMO1Q92556 727 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 FAM136AQ96C01 138 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 MTBPQ96DY7 904 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 LINC00615Q96LM1 132 aaPredicted RBP15.49■□□□□ 0.07
CDPF1-204ENST00000404744 GPR22Q99680 433 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 DHRS4Q9BTZ2 278 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 ZDHHC5Q9C0B5 715 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 TRNAU1APQ9NX07 287 aaKnown RBP15.49■□□□□ 0.07
CDPF1-204ENST00000404744 FAM8A1Q9UBU6 413 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 TRMT6Q9UJA5 497 aaKnown RBP15.49■□□□□ 0.07
CDPF1-204ENST00000404744 TNRC6BQ9UPQ9 1833 aaKnown RBP15.49■□□□□ 0.07
CDPF1-204ENST00000404744 FANCMQ8IYD8 2048 aa15.49■□□□□ 0.07
CDPF1-204ENST00000404744 C17orf113A0A1B0GUU1 675 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 MGAT4DA6NG13 374 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 GOLGA6L10A6NI86 522 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 PATE3B3GLJ2 98 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 DYNC1I1O14576 645 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 SGTAO43765 313 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 DFNA5O60443 496 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 LMNAP02545 664 aaKnown RBP15.48■□□□□ 0.07
CDPF1-204ENST00000404744 APOA4P06727 396 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 GCAP28676 217 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 NBL1P41271 181 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 ATXN3P54252 364 aaPredicted RBP15.48■□□□□ 0.07
CDPF1-204ENST00000404744 ILF3Q12906 894 aaKnown RBP eCLIP15.48■□□□□ 0.07
CDPF1-204ENST00000404744 GRIK2Q13002 908 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 CCDC6Q16204 474 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 TTLL9Q3SXZ7 439 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 RAPH1Q70E73 1250 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 CFAP206Q8IYR0 622 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 DCLK2Q8N568 766 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 SUMF1Q8NBK3 374 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 OR2L2Q8NH16 312 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 HM13Q8TCT9 377 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 ELF4Q99607 663 aaPredicted RBP15.48■□□□□ 0.07
CDPF1-204ENST00000404744 TIMM29Q9BSF4 260 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 MCMBPQ9BTE3 642 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 TMEM109Q9BVC6 243 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 KLC4Q9NSK0 619 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 NCDNQ9UBB6 729 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 SPASTQ9UBP0 616 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 DNAJC16Q9Y2G8 782 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 NFS1Q9Y697 457 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 SPAG17Q6Q759 2223 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 TRIM49D1C9J1S8 452 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 NME1P15531 152 aaKnown RBP15.48■□□□□ 0.07
CDPF1-204ENST00000404744 STMN1P16949 149 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 KRT15P19012 456 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 ARHGAP8P85298 464 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 BOP1Q14137 746 aaKnown RBP15.48■□□□□ 0.07
CDPF1-204ENST00000404744 RASA2Q15283 850 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 ELOCQ15369 112 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 PRRT3Q5FWE3 981 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 PRAMEF14Q5SWL7 426 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 ASZ1Q8WWH4 475 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 ANKRD7Q92527 254 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 INPP5DQ92835 1189 aa15.48■□□□□ 0.07
CDPF1-204ENST00000404744 TMEM159Q96B96 161 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms