RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 QSOX1O00391 747 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 STX16O14662 325 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 HDAC3O15379 428 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 GRID2O43424 1007 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 TSPAN6O43657 245 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 AP1G1O43747 822 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 SGTAO43765 313 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 SIX3O95343 332 aaPredicted RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 COPAP53621 1224 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 CORO7P57737 925 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 TAS2R38P59533 333 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 RPS14P62263 151 aaKnown RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 TMEM115Q12893 351 aaPredicted RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 STARD3Q14849 445 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 SKIV2LQ15477 1246 aaKnown RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 TGFBIQ15582 683 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 SPDYAQ5MJ70 313 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 ZNF648Q5T619 568 aaPredicted RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 VWA5B1Q5TIE3 1220 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 AGBL4Q5VU57 503 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 ZNF776Q68DI1 518 aaPredicted RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 KIAA1211LQ6NV74 962 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 CLNKQ7Z7G1 428 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 ADAMTSL2Q86TH1 951 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 ALYREFQ86V81 257 aaKnown RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 PELI3Q8N2H9 469 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 LRCH3Q96II8 777 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 ACTR5Q9H9F9 607 aaPredicted RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 CD274Q9NZQ7 290 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 SLC12A4Q9UP95 1085 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 LRRC14BA6NHZ5 514 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 FCHO1O14526 889 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 KPNA5O15131 536 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 INPP4BO15327 924 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 SNX2O60749 519 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 CCDC22O60826 627 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 ADAM23O75077 832 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 KLF8O95600 359 aaPredicted RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 SOD1P00441 154 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 ENO3P13929 434 aaPredicted RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 GPR1P46091 355 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 SCTRP47872 440 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 ALDH18A1P54886 795 aaKnown RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 CDH13P55290 713 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 TUBB3Q13509 450 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 IER5LQ5T953 404 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 SEL1L3Q68CR1 1132 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 ANKS6Q68DC2 871 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 SBSNQ6UWP8 590 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 CUZD1Q86UP6 607 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 CACUL1Q86Y37 369 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 RASGEF1AQ8N9B8 481 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 MAPK15Q8TD08 544 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 ASB2Q96Q27 587 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 C1QTNF3Q9BXJ4 246 aa13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 FAM126AQ9BYI3 521 aaPredicted RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 MKRN2Q9H000 416 aaKnown RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 TSR3Q9UJK0 312 aaKnown RBP13.09□□□□□ -0.31
CEACAM1-206ENST00000403136 UNC80Q8N2C7 3258 aa13.08□□□□□ -0.31
CEACAM1-206ENST00000403136 A0A1W2PQF6 199 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 NCF1BA6NI72 391 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 NCF1CA8MVU1 366 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 K7ESM1 405 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 UBFD1O14562 309 aaKnown RBP13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 DIAPH2O60879 1101 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 ASGR2P07307 311 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 NCF1P14598 390 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 GLULP15104 373 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 TSPAN8P19075 237 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 EEF1DP29692 281 aaKnown RBP13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 NAA20P61599 178 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 MRPS21P82921 87 aaKnown RBP13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 HSPA14Q0VDF9 509 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 GBX1Q14549 363 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 SLC9B1Q4ZJI4 515 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 SH2D4BQ5SQS7 431 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 PLEKHS1Q5SXH7 462 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 TRMT11Q7Z4G4 463 aaKnown RBP13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 PHYKPLQ8IUZ5 450 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 NMUR2Q9GZQ4 415 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 FBRSQ9HAH7 460 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 SAR1AQ9NR31 198 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 UTP6Q9NYH9 597 aaKnown RBP13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 NUDT4Q9NZJ9 180 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 SERGEFQ9UGK8 458 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 ADAMTS6Q9UKP5 1117 aa13.08□□□□□ -0.32
CEACAM1-206ENST00000403136 TICRRQ7Z2Z1 1910 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 A0A1W2PP55 124 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 IGLON5A6NGN9 336 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 OR2AG2A6NM03 316 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 RAD51BO15315 384 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 NUAK1O60285 661 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 RNASEH2AO75792 299 aaKnown RBP13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 TM7SF2O76062 418 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 PCDH8O95206 1070 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 FTH1P02794 183 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 SERPINA6P08185 405 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 HOXB2P14652 356 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 CTSCP53634 463 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 ACTN3Q08043 901 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms