RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ATP4BP51164 291 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 SLC5A3P53794 718 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 CYP4F3Q08477 520 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 ZNF155Q12901 538 aaPredicted RBP8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 TIGD2Q4W5G0 525 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 ATG14Q6ZNE5 492 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 SLC24A5Q71RS6 500 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 ATCAYQ86WG3 371 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 CPXM1Q96SM3 734 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 BCL2L14Q9BZR8 327 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 TMED5Q9Y3A6 229 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 SMIM28A0A1B0GU29 152 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 C2CD4BA6NLJ0 364 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 ZNF487B1APH4 448 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 CLDN5O00501 218 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 SLC22A1O15245 554 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 UBXN7O94888 489 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 PTPN5P54829 565 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 MVKQ03426 396 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 FAM189A2Q15884 450 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 SNAPC1Q16533 368 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 CPSF6Q16630 551 aaKnown RBP eCLIP8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 FBXO43Q4G163 708 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 NOL9Q5SY16 702 aaKnown RBP8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 RHBDF2Q6PJF5 856 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 KIAA1324Q6UXG2 1013 aaKnown RBP8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 CHST9Q7L1S5 443 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 ANKS1BQ7Z6G8 1248 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 SLC43A3Q8NBI5 491 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 RAD51AP1Q96B01 352 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 NXNL1Q96CM4 212 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 SLC29A3Q9BZD2 475 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 GLIS2Q9BZE0 524 aaPredicted RBP8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 DENND2DQ9H6A0 471 aaPredicted RBP8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 CFAP97Q9P2B7 532 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 MEMO1Q9Y316 297 aa8.27□□□□□ -1.08
SPTLC3-201ENST00000399002 A0A0U1RQJ8 604 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 A0A1W2PRG6 482 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 CXCR6O00574 342 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 B4GALT5O43286 388 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 ANGPTL1O95841 491 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 ZBTB48P10074 688 aaPredicted RBP8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 PRMT2P55345 433 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 ZNF33AQ06730 810 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 USP4Q13107 963 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 CCNIQ14094 377 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 DPYSL2Q16555 572 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 PLCZ1Q86YW0 608 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 LIX1Q8N485 282 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 LPGAT1Q92604 370 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 C1orf21Q9H246 121 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 IPPKQ9H8X2 491 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 DKK3Q9UBP4 350 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 MGAT4AQ9UM21 535 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 PDE10AQ9Y233 779 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 SLC45A1Q9Y2W3 748 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 IL1BP01584 269 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 ATP5A1P25705 553 aaKnown RBP8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 VARSP26640 1264 aaKnown RBP8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 ABCG1P45844 678 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 EIF5AP63241 154 aaKnown RBP8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 SP3Q02447 781 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 RALGDSQ12967 914 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 HNRNPDQ14103 355 aaKnown RBP8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 SLC1A5Q15758 541 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 PERM1Q5SV97 790 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 ZNF567Q8N184 647 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 AVL9Q8NBF6 648 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 FBXO22Q8NEZ5 403 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 COPS5Q92905 334 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 FUBP3Q96I24 572 aaKnown RBP eCLIP8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 ZNF514Q96K75 400 aaPredicted RBP8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 B3GALT6Q96L58 329 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 NMUR2Q9GZQ4 415 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 C1orf109Q9NX04 203 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 RPL36Q9Y3U8 105 aaKnown RBP8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 MOXD2PA6NHM9 499 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 A8MX80 341 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 MATN2O00339 956 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 CLDN4O14493 209 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 KLF11O14901 512 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 PRODHO43272 600 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 IFNA6P05013 189 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 GSTM3P21266 225 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 HNF4AP41235 474 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 RORCP51449 518 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 GNA12Q03113 381 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 HEPACAMQ14CZ8 416 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 TMPRSS11BQ86T26 416 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 OR4K2Q8NGD2 314 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 IL31RAQ8NI17 732 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 FCRL5Q96RD9 977 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 TCF25Q9BQ70 676 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 MFSD1Q9H3U5 465 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 SLC35C2Q9NQQ7 365 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 ARHGEF4Q9NR80 690 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 ZIM2Q9NZV7 527 aa8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 GOT2P00505 430 aaKnown RBP8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 ANXA4P09525 319 aaPredicted RBP8.27□□□□□ -1.09
SPTLC3-201ENST00000399002 SP100P23497 879 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms