RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 LRCH1Q9Y2L9 728 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 GPC6Q9Y625 555 aaPredicted RBP14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 UGT2B17O75795 530 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 CDH5P33151 784 aaPredicted RBP14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 HTR7P34969 479 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 TAB1Q15750 504 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 PTPN20Q4JDL3 420 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 BEND5Q7L4P6 421 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 CUZD1Q86UP6 607 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 JAZF1Q86VZ6 243 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 UBR7Q8N806 425 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 OR7A2PQ8NGA2 310 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 NTPCRQ9BSD7 190 aaKnown RBP14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 CDH19Q9H159 772 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 FAM83DQ9H4H8 585 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 SEMA3GQ9NS98 782 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 KCTD5Q9NXV2 234 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 MAP4K5Q9Y4K4 846 aa14.1□□□□□ -0.15
PCDHA11-201ENST00000398640 GABRB2P47870 512 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 STXBP1P61764 594 aaKnown RBP14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 SLC13A2Q13183 592 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 NFATC2Q13469 925 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 NAE1Q13564 534 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 ATP13A5Q4VNC0 1218 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 TIGD2Q4W5G0 525 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 GK5Q6ZS86 529 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 PIWIL4Q7Z3Z4 852 aaKnown RBP14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 PIH1D2Q8WWB5 315 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 XAGE5Q8WWM1 108 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 CSPG4P5Q96PW8 444 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 PCDHB18PQ96TA0 734 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 ZNF222Q9UK12 451 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 PRAMEF1O95521 474 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 POP4O95707 220 aaKnown RBP14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 IDO1P14902 403 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 CCINQ13939 588 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 CDCA2Q69YH5 1023 aaPredicted RBP14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 TMEM220Q6QAJ8 160 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 NET1Q7Z628 596 aaPredicted RBP14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 SLC4A11Q8NBS3 891 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 HDAC3O15379 428 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 PSIP1O75475 530 aaKnown RBP14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 PRKCGP05129 697 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 HNRNPA1P09651 372 aaKnown RBP eCLIP14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 AVPR1BP47901 424 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 FAM91A1Q658Y4 838 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 NAIF1Q69YI7 327 aaPredicted RBP14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 SLC43A3Q8NBI5 491 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 KCT2Q8NC54 265 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 ERVK-5Q9HDB9 667 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 TIMM22Q9Y584 194 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 SIN3BO75182 1162 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 KCNE1P15382 129 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 EDNRBP24530 442 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 POTEHQ6S545 545 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 DEPDC4Q8N2C3 294 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 AADATQ8N5Z0 425 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 PHOSPHO2Q8TCD6 241 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 C12orf66Q96MD2 445 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 TDP1Q9NUW8 608 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 COMMD9Q9P000 198 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 CD207Q9UJ71 328 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 C3orf18Q9UK00 162 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 TRAF6Q9Y4K3 522 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 KRT36O76013 467 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 SAGP10523 405 aaPredicted RBP14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 MPSTP25325 297 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 STAT5AP42229 794 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 GNA12Q03113 381 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 LGALS3BPQ08380 585 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 C2orf80Q0P641 193 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 COL9A3Q14050 684 aaPredicted RBP14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 MZT2BQ6NZ67 158 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 MMAAQ8IVH4 418 aaKnown RBP14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 FCRL4Q96PJ5 515 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 KCND1Q9NSA2 647 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 EXD2Q9NVH0 621 aa14.09□□□□□ -0.15
PCDHA11-201ENST00000398640 DCLK1O15075 740 aa14.08□□□□□ -0.15
PCDHA11-201ENST00000398640 ITGA3P26006 1051 aa14.08□□□□□ -0.15
PCDHA11-201ENST00000398640 NAA20P61599 178 aa14.08□□□□□ -0.15
PCDHA11-201ENST00000398640 ENPEPQ07075 957 aa14.08□□□□□ -0.15
PCDHA11-201ENST00000398640 DUPD1Q68J44 220 aa14.08□□□□□ -0.15
PCDHA11-201ENST00000398640 CXXC5Q7LFL8 322 aaKnown RBP14.08□□□□□ -0.15
PCDHA11-201ENST00000398640 RDH11Q8TC12 318 aa14.08□□□□□ -0.15
PCDHA11-201ENST00000398640 PMM1Q92871 262 aa14.08□□□□□ -0.15
PCDHA11-201ENST00000398640 ADGRE2Q9UHX3 823 aa14.08□□□□□ -0.15
PCDHA11-201ENST00000398640 KCNU1A8MYU2 1149 aa14.08□□□□□ -0.16
PCDHA11-201ENST00000398640 PSMD7P51665 324 aa14.08□□□□□ -0.16
PCDHA11-201ENST00000398640 TSC22D1Q15714 1073 aa14.08□□□□□ -0.16
PCDHA11-201ENST00000398640 BROXQ5VW32 411 aa14.08□□□□□ -0.16
PCDHA11-201ENST00000398640 TTC23Q5W5X9 447 aa14.08□□□□□ -0.16
PCDHA11-201ENST00000398640 ZNF730Q6ZMV8 503 aa14.08□□□□□ -0.16
PCDHA11-201ENST00000398640 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.08□□□□□ -0.16
PCDHA11-201ENST00000398640 PACS2Q86VP3 889 aa14.08□□□□□ -0.16
PCDHA11-201ENST00000398640 UNC5BQ8IZJ1 945 aa14.08□□□□□ -0.16
PCDHA11-201ENST00000398640 RP9Q8TA86 221 aaKnown RBP14.08□□□□□ -0.16
PCDHA11-201ENST00000398640 ZIC5Q96T25 663 aa14.08□□□□□ -0.16
PCDHA11-201ENST00000398640 GPER1Q99527 375 aa14.08□□□□□ -0.16
PCDHA11-201ENST00000398640 C12orf65Q9H3J6 166 aaKnown RBP14.08□□□□□ -0.16
PCDHA11-201ENST00000398640 PHF11Q9UIL8 331 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms