RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 KLF1Q13351 362 aaPredicted RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 TGFBIQ15582 683 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 IQCCQ4KMZ1 466 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 LCN1P1Q5VSP4 162 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 TTC33Q6PID6 262 aaPredicted RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 DCXRQ7Z4W1 244 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC37A3Q8NCC5 494 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 FAM156AQ8NDB6 213 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 OR14C36Q8NHC7 312 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 FEZF2Q8TBJ5 459 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 HTRA1Q92743 480 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 MARVELD3Q96A59 401 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 FAM213AQ9BRX8 229 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 TEX12Q9BXU0 123 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 SAV1Q9H4B6 383 aaPredicted RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 SIAEQ9HAT2 523 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 PLGRKTQ9HBL7 147 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 TCF7L1Q9HCS4 588 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 SSU72Q9NP77 194 aaKnown RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 NRIP3Q9NQ35 241 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 FOXD3Q9UJU5 478 aaPredicted RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 DRG1Q9Y295 367 aaKnown RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 FAM172BPA6NC97 362 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 H2AFYO75367 372 aaKnown RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 CCNB2O95067 398 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 ARF3P61204 181 aaPredicted RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 ARF1P84077 181 aaKnown RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 NFYCQ13952 458 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 FAM69AQ5T7M9 428 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 LRRC38Q5VT99 294 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 DNAJC24Q6P3W2 148 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 TMEM270Q6UE05 265 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 C5orf46Q6UWT4 87 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 TUSC5Q8IXB3 177 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 DNAJC9Q8WXX5 260 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 PIGKQ92643 395 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 PIWIL1Q96J94 861 aaKnown RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 ELMO2Q96JJ3 720 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 PWWP2AQ96N64 755 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 CITED2Q99967 270 aaPredicted RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 FAM118BQ9BPY3 351 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 ZFYVE21Q9BQ24 234 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 CHID1Q9BWS9 393 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 EPB41L1Q9H4G0 881 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 EVA1AQ9H8M9 152 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 KCNK12Q9HB15 430 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 GIMAP4Q9NUV9 329 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 CAMK2AQ9UQM7 478 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 CHKBQ9Y259 395 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 ACOT9Q9Y305 439 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 CLDN16Q9Y5I7 305 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 RAD54BQ9Y620 910 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 CLCA3PQ9Y6N3 262 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 USP34Q70CQ2 3546 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 A0A0G2JMZ2 1700 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 TCP10L2B9ZVM9 353 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 ADM5C9JUS6 153 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 ATXN7O15265 892 aaPredicted RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 LIASO43766 372 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 RNF224P0DH78 156 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 KLRC2P26717 231 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 OXTRP30559 389 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 PPP3CCP48454 512 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 HOXA1P49639 335 aaPredicted RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 SKP1P63208 163 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 ALDH6A1Q02252 535 aaKnown RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 PRKCQQ04759 706 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 PTPN11Q06124 597 aaPredicted RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 NCOA4Q13772 614 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 GSTA3Q16772 222 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 FNDC3BQ53EP0 1204 aaKnown RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 STEAP3Q658P3 488 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 CIAPIN1Q6FI81 312 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 C1orf94Q6P1W5 598 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 C6orf15Q6UXA7 325 aaPredicted RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 MON1BQ7L1V2 547 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 EFL1Q7Z2Z2 1120 aaKnown RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 PHF13Q86YI8 300 aaPredicted RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.52□□□□□ -1.374e-7■■■■■ 68.2
TM9SF4-202ENST00000398022 ABRAQ8N0Z2 381 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 TTC29Q8NA56 475 aaPredicted RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 FAM13CQ8NE31 585 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 ZSWIM2Q8NEG5 633 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 OR5T1Q8NG75 326 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 AKR7LQ8NHP1 331 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 MCMBPQ9BTE3 642 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 CDADC1Q9BWV3 514 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 PARD6GQ9BYG4 376 aaPredicted RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 ZMAT3Q9HA38 289 aaKnown RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 DECR2Q9NUI1 292 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 FAM120CQ9NX05 1096 aaKnown RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 THUMPD1Q9NXG2 353 aaKnown RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 TJP2Q9UDY2 1190 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 UBIAD1Q9Y5Z9 338 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 GTPBP1O00178 669 aaKnown RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 MED7O43513 233 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 CTAG2O75638 210 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 MT-CO1P00395 513 aa6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 CNPP09543 421 aaKnown RBP6.52□□□□□ -1.37
TM9SF4-202ENST00000398022 OCM2P0CE71 109 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms