RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 EPB41L1Q9H4G0 881 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 AIG1Q9NVV5 245 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 GID8Q9NWU2 228 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 VPS51Q9UID3 782 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PKP3Q9Y446 797 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 BACE2Q9Y5Z0 518 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 VPS4BO75351 444 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 GKP32189 559 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CSKP41240 450 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CLCN4P51793 760 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CLCN7P51798 805 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 KCNK10P57789 538 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ERVPABLB-1P60509 514 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 FAM151BQ6UXP7 276 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 NANOGNBQ7Z5D8 188 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 FNDC8Q8TC99 324 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 MYRFLQ96LU7 910 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 FAIMQ9NVQ4 179 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 RNF11Q9Y3C5 154 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 SLC30A1Q9Y6M5 507 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 A0A1W2PP18 115 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 SOCS2O14508 198 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 EFEMP2O95967 443 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 MTHFD1P11586 935 aaKnown RBP18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 OXTRP30559 389 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PTGER3P43115 390 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 RPL5P46777 297 aaKnown RBP18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 TBCELQ5QJ74 424 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 LETMD1Q6P1Q0 360 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ZBTB49Q6ZSB9 765 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CHERPQ8IWX8 916 aaKnown RBP18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ZFRQ96KR1 1074 aaKnown RBP18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ANAPC1Q9H1A4 1944 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 SAC3D1A6NKF1 404 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 H7C0S8 307 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 LSM1O15116 133 aaKnown RBP18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ABLIM3O94929 683 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ESR1P03372 595 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ATN1P54259 1190 aaPredicted RBP18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 RCAN2Q14206 197 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 NADK2Q4G0N4 442 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PRMT9Q6P2P2 845 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 SPATA19Q7Z5L4 167 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 TMCO2Q7Z6W1 182 aaPredicted RBP18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 FNDC5Q8NAU1 212 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 NUDT8Q8WV74 236 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 TMEM74Q96NL1 305 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 BOCQ9BWV1 1114 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 NUSAP1Q9BXS6 441 aaKnown RBP18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 P2RY12Q9H244 342 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ZNF696Q9H7X3 374 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CREBZFQ9NS37 354 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CCM2LQ9NUG4 571 aaPredicted RBP18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PCDHA9Q9Y5H5 950 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 COMMD10Q9Y6G5 202 aa18.11■□□□□ 0.49
CHRFAM7A-202ENST00000397827 DHRS12A0PJE2 317 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PITPNM1O00562 1244 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 FZD6O60353 706 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 SLC22A3O75751 556 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 HSD17B1P14061 328 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 HTR6P50406 440 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CCR3P51677 355 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PRKCQQ04759 706 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 TIGD2Q4W5G0 525 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 AARS2Q5JTZ9 985 aaKnown RBP18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 Q6ZSR9 355 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 TMEM150AQ86TG1 271 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 AUTS2Q8WXX7 1259 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 HHIPL1Q96JK4 782 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PIF1Q9H611 641 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ARMC1Q9NVT9 282 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CCDC154A6NI56 674 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 A8MX80 341 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ARPC2O15144 300 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 SMAD6O43541 496 aaKnown RBP18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 NCK1P16333 377 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 IL12AP29459 219 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CDH18Q13634 790 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 C6orf136Q5SQH8 315 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 SPOUT1Q5T280 376 aaKnown RBP18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 FRA10AC1Q70Z53 315 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ERMP1Q7Z2K6 904 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 DNAJB7Q7Z6W7 309 aaPredicted RBP18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CLDN19Q8N6F1 224 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PAF1Q8N7H5 531 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ARL14EPQ8N8R7 260 aaPredicted RBP18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ZUFSPQ96AP4 578 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 TMEM125Q96AQ2 219 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CEP295NLQ96MC4 621 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 TMEM79Q9BSE2 394 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CIPCQ9C0C6 399 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 HACD3Q9P035 362 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 USP22Q9UPT9 525 aa18.1■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PRMT5O14744 637 aaPredicted RBP18.09■□□□□ 0.49
CHRFAM7A-202ENST00000397827 SYNCRIPO60506 623 aaKnown RBP18.09■□□□□ 0.49
CHRFAM7A-202ENST00000397827 KATNA1O75449 491 aa18.09■□□□□ 0.49
CHRFAM7A-202ENST00000397827 GUCA1CO95843 209 aa18.09■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CAPN1P07384 714 aa18.09■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PCSK6P29122 969 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms