RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 GRHL1Q9NZI5 618 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 PILRAQ9UKJ1 303 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 NFU1Q9UMS0 254 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 SHOC2Q9UQ13 582 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 CHKBQ9Y259 395 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 USP9XQ93008 2570 aaPredicted RBP13.51□□□□□ -0.25
SEC13-205ENST00000397101 MYO9AB2RTY4 2548 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 BLACEA4D250 179 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 RHPN2P1A8MT19 583 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 TUBBP07437 444 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 MAP4P27816 1152 aaKnown RBP13.51□□□□□ -0.25
SEC13-205ENST00000397101 ALDH4A1P30038 563 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 CSTF2P33240 577 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEC13-205ENST00000397101 ARL4CP56559 192 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 CDK16Q00536 496 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 MC1RQ01726 317 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 KLRB1Q12918 225 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 OLIG2Q13516 323 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 AMZ1Q400G9 498 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 LACTB2Q53H82 288 aaPredicted RBP13.51□□□□□ -0.25
SEC13-205ENST00000397101 DCAF12Q5T6F0 453 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 ALG1LQ6GMV1 187 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 KDELC1Q6UW63 502 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 PLA2G15Q8NCC3 412 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 LPCAT1Q8NF37 534 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 OR52K1Q8NGK4 314 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 CCL4L1Q8NHW4 92 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 FBXO25Q8TCJ0 367 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 ZDHHC1Q8WTX9 485 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 APOBEC4Q8WW27 367 aaKnown RBP13.51□□□□□ -0.25
SEC13-205ENST00000397101 PMEPA1Q969W9 287 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 ABHD17AQ96GS6 310 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 MRGPRX2Q96LB1 330 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 GORASP1Q9BQQ3 440 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 ZPBPQ9BS86 351 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 ADGRE3Q9BY15 652 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 GSDMCQ9BYG8 508 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 FAM129AQ9BZQ8 928 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 PIH1D1Q9NWS0 290 aaKnown RBP13.51□□□□□ -0.25
SEC13-205ENST00000397101 KCTD5Q9NXV2 234 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 PDP2Q9P2J9 529 aa13.51□□□□□ -0.25
SEC13-205ENST00000397101 ZFC3H1O60293 1989 aaKnown RBP13.51□□□□□ -0.25
SEC13-205ENST00000397101 UQCRHLA0A096LP55 91 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 PRSS38A1L453 326 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 AP3B1O00203 1094 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 AGRPO00253 132 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 RECQL5O94762 991 aaPredicted RBP13.5□□□□□ -0.25
SEC13-205ENST00000397101 TMEM63AO94886 807 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 CPP00450 1065 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 FGF1P05230 155 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 UQCRHP07919 91 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 SESN2P58004 480 aaPredicted RBP13.5□□□□□ -0.25
SEC13-205ENST00000397101 VSNL1P62760 191 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 GPLD1P80108 840 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 CDC20Q12834 499 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 CDH17Q12864 832 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 TRAF2Q12933 501 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 RALGDSQ12967 914 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 GALNT3Q14435 633 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 SLC14A2Q15849 920 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 BBS9Q3SYG4 887 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 DNAJC21Q5F1R6 531 aaKnown RBP13.5□□□□□ -0.25
SEC13-205ENST00000397101 CEP128Q6ZU80 1094 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 GSPT2Q8IYD1 628 aaKnown RBP13.5□□□□□ -0.25
SEC13-205ENST00000397101 NLGN4XQ8N0W4 816 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 PDIK1LQ8N165 341 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 MCUQ8NE86 351 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 NLGN4YQ8NFZ3 816 aaPredicted RBP13.5□□□□□ -0.25
SEC13-205ENST00000397101 SEC14L1Q92503 715 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 KIAA1143Q96AT1 154 aaPredicted RBP13.5□□□□□ -0.25
SEC13-205ENST00000397101 ECHDC3Q96DC8 303 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 FMO2Q99518 471 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 TDRD1Q9BXT4 1180 aaKnown RBP13.5□□□□□ -0.25
SEC13-205ENST00000397101 FRMD8Q9BZ67 464 aaPredicted RBP13.5□□□□□ -0.25
SEC13-205ENST00000397101 WDR26Q9H7D7 661 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 CYP4F12Q9HCS2 524 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 XAB2Q9HCS7 855 aaKnown RBP13.5□□□□□ -0.25
SEC13-205ENST00000397101 ZNF71Q9NQZ8 489 aaPredicted RBP13.5□□□□□ -0.25
SEC13-205ENST00000397101 IGSF5Q9NSI5 407 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 SPATS2LQ9NUQ6 558 aaKnown RBP13.5□□□□□ -0.25
SEC13-205ENST00000397101 SLC39A1Q9NY26 324 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 BFARQ9NZS9 450 aa13.5□□□□□ -0.25
SEC13-205ENST00000397101 ARHGEF17Q96PE2 2063 aaPredicted RBP13.49□□□□□ -0.25
SEC13-205ENST00000397101 UNC79Q9P2D8 2635 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 A0A1W2PQ67 120 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 ENO4A6NNW6 628 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 NKX2-8O15522 239 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 SOCS5O75159 536 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 SUN1O94901 812 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 NDST3O95803 873 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 MYCLP1P12525 358 aaPredicted RBP13.49□□□□□ -0.25
SEC13-205ENST00000397101 TPH1P17752 444 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 HLA-DPA1P20036 260 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 NFKBIAP25963 317 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 GRIA1P42261 906 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 MAGEA6P43360 314 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 MAZP56270 477 aaKnown RBP13.49□□□□□ -0.25
SEC13-205ENST00000397101 POLR2LP62875 67 aaKnown RBP13.49□□□□□ -0.25
SEC13-205ENST00000397101 ABHD18Q0P651 414 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 ILF3Q12906 894 aaKnown RBP eCLIP13.49□□□□□ -0.251e-6■■■□□ 16.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms