RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ZNF574Q6ZN55 896 aaPredicted RBP13.7□□□□□ -0.22
SEC13-204ENST00000397099 TMEM26Q6ZUK4 368 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 NLRP9Q7RTR0 991 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 RASGEF1AQ8N9B8 481 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 SNRNP27Q8WVK2 155 aaKnown RBP13.7□□□□□ -0.22
SEC13-204ENST00000397099 PEX13Q92968 403 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 CXorf40BQ96DE9 158 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 CCDC74BQ96LY2 380 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 TAAR9Q96RI9 348 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 COPS8Q99627 209 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 APOL2Q9BQE5 337 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 CCM2Q9BSQ5 444 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 DDA1Q9BW61 102 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 UGT1A7Q9HAW7 530 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 UGT1A10Q9HAW8 530 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 UGT1A8Q9HAW9 530 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 NLE1Q9NVX2 485 aaPredicted RBP13.7□□□□□ -0.22
SEC13-204ENST00000397099 PAK5Q9P286 719 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 CRLS1Q9UJA2 301 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 DRG1Q9Y295 367 aaKnown RBP13.7□□□□□ -0.22
SEC13-204ENST00000397099 DNAJC16Q9Y2G8 782 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 SMG1Q96Q15 3661 aaKnown RBP13.69□□□□□ -0.22
SEC13-204ENST00000397099 AHCTF1Q8WYP5 2266 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 C17orf113A0A1B0GUU1 675 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 B4E171 279 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 LDB2O43679 373 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 BUD23O43709 281 aaKnown RBP13.69□□□□□ -0.22
SEC13-204ENST00000397099 SUN1O94901 812 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 METTL18O95568 372 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 ANKRD34CP0C6C1 535 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 LIPCP11150 499 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 PSMA3P25788 255 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 MSNP26038 577 aaKnown RBP13.69□□□□□ -0.22
SEC13-204ENST00000397099 TSPAN7P41732 249 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 LMAN1P49257 510 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 XIAPP98170 497 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 C19orf57Q0VDD7 668 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 C16orf72Q14CZ0 275 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 PLA2G4EQ3MJ16 856 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 KHDC1Q4VXA5 237 aaKnown RBP13.69□□□□□ -0.22
SEC13-204ENST00000397099 NKAIN2Q5VXU1 208 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 METRNLQ641Q3 311 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 TMPRSS9Q7Z410 1059 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 NXPE1Q8N323 547 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 DNAAF3Q8N9W5 541 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 OR2L2Q8NH16 312 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 NCSTNQ92542 709 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 TTC1Q99614 292 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 RAB33BQ9H082 229 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 SLC40A1Q9NP59 571 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 FKBPLQ9UIM3 349 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 RIMKLBQ9ULI2 386 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 PPP2R2CQ9Y2T4 447 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 HEBP2Q9Y5Z4 205 aa13.69□□□□□ -0.22
SEC13-204ENST00000397099 MN1Q10571 1320 aaPredicted RBP13.68□□□□□ -0.22
SEC13-204ENST00000397099 TCRBV7S2A1N4TA0A589 114 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 HEATR9A2RTY3 570 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 STMND1H3BQB6 276 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 TK2O00142 265 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 UBXN7O94888 489 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 IFNB1P01574 187 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 HGFP14210 728 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 ATP1B2P14415 290 aaPredicted RBP13.68□□□□□ -0.22
SEC13-204ENST00000397099 AMD1P17707 334 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 NDUFS1P28331 727 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 CSF2RBP32927 897 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 PPARGP37231 505 aaPredicted RBP13.68□□□□□ -0.22
SEC13-204ENST00000397099 SLC19A1P41440 591 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 MAPK10P53779 464 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 GDF10P55107 478 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 CCZ1BP86790 482 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 CCZ1P86791 482 aaPredicted RBP13.68□□□□□ -0.22
SEC13-204ENST00000397099 CACNG1Q06432 222 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 VAC14Q08AM6 782 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 SEMA5AQ13591 1074 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 FNBP1LQ5T0N5 605 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 DCAF12Q5T6F0 453 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 LYPLAL1Q5VWZ2 237 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 ARMC3Q5W041 872 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 ARHGAP22Q7Z5H3 698 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 OR13C4Q8NGS5 318 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 ATG4AQ8WYN0 398 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 ANP32BQ92688 251 aaKnown RBP13.68□□□□□ -0.22
SEC13-204ENST00000397099 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.68□□□□□ -0.22
SEC13-204ENST00000397099 ZDHHC12Q96GR4 267 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 CCNL2Q96S94 520 aaPredicted RBP13.68□□□□□ -0.22
SEC13-204ENST00000397099 NAP1L3Q99457 506 aaPredicted RBP13.68□□□□□ -0.22
SEC13-204ENST00000397099 ZNF624Q9P2J8 865 aaPredicted RBP13.68□□□□□ -0.22
SEC13-204ENST00000397099 EPHA6Q9UF33 1036 aa13.68□□□□□ -0.22
SEC13-204ENST00000397099 IGLV3-16A0A075B6K0 115 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 TRBV5-4A0A0C4DH59 114 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 MROH6A6NGR9 719 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 OR2AG2A6NM03 316 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 ERVH48-1M5A8F1 160 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 AP2A2O94973 939 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 C9P02748 559 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 BRAFP15056 766 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 ACRV1P26436 265 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 RPL10P27635 214 aaKnown RBP13.67□□□□□ -0.22
SEC13-204ENST00000397099 MC4RP32245 332 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms