RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 C1orf74Q96LT6 269 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 BARD1Q99728 777 aaKnown RBP13.77□□□□□ -0.21
NUP98-204ENST00000397004 PTPN18Q99952 460 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 SLC30A1Q9Y6M5 507 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 ABCB7O75027 752 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 JRKO75564 520 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 FCGR1AP12314 374 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 TTKP33981 857 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 GRIK1P39086 918 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 PPP2R2BQ00005 443 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 FPGSQ05932 587 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 RHBDF1Q96CC6 855 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 SH3YL1Q96HL8 342 aaPredicted RBP13.76□□□□□ -0.21
NUP98-204ENST00000397004 DERL2Q9GZP9 239 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 PCDH12Q9NPG4 1184 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 PKD2L2Q9NZM6 624 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 TMEM9Q9P0T7 183 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 IGLV3-10A0A075B6K4 115 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 UBA6A0AVT1 1052 aaPredicted RBP13.76□□□□□ -0.21
NUP98-204ENST00000397004 RPP40O75818 363 aaKnown RBP13.76□□□□□ -0.21
NUP98-204ENST00000397004 B3GALT4O96024 378 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 CDH1P12830 882 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 CA5AP35218 305 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 MTHFRP42898 656 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 KPNA1P52294 538 aaPredicted RBP13.76□□□□□ -0.21
NUP98-204ENST00000397004 CTSL3PQ5NE16 218 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 PSAPL1Q6NUJ1 521 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 C1QTNF3Q9BXJ4 246 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 DGCR6LQ9BY27 220 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 CATSPERZQ9NTU4 200 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 SLC25A37Q9NYZ2 338 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 GMIPQ9P107 970 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 SOAT2O75908 522 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 ALBP02768 609 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 THRBP10828 461 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 UMPSP11172 480 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 GRK4P32298 578 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 RAP1GAP2Q684P5 730 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 SPATA19Q7Z5L4 167 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 STAG3L4Q8TBR4 150 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 TSPEARQ8WU66 669 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 RSPH1Q8WYR4 309 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 ASB2Q96Q27 587 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 ALPK1Q96QP1 1244 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 ADNPQ9H2P0 1102 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 KIAA1522Q9P206 1035 aaPredicted RBP13.76□□□□□ -0.21
NUP98-204ENST00000397004 LEF1Q9UJU2 399 aaPredicted RBP13.76□□□□□ -0.21
NUP98-204ENST00000397004 CCL27Q9Y4X3 112 aa13.76□□□□□ -0.21
NUP98-204ENST00000397004 LCHNA4D1U4 455 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 M0QZQ0 153 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 BTN3A1O00481 513 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 MLYCDO95822 493 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 HALP42357 657 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 ZNF140P52738 457 aaPredicted RBP13.75□□□□□ -0.21
NUP98-204ENST00000397004 ERVK-8P63133 956 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 PDCD4Q53EL6 469 aaKnown RBP13.75□□□□□ -0.21
NUP98-204ENST00000397004 ANKS6Q68DC2 871 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 SULT1C3Q6IMI6 304 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 NCCRP1Q6ZVX7 275 aaPredicted RBP13.75□□□□□ -0.21
NUP98-204ENST00000397004 DPP10Q8N608 796 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 FNDC5Q8NAU1 212 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 HGH1Q9BTY7 390 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 SMPD4Q9NXE4 827 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 FAM92AA1XBS5 289 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 KRBA1A5PL33 1030 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 PRLP01236 227 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 GGT1P19440 569 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 ACVR2AP27037 513 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 GSTM2P28161 218 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 TGFBR1P36897 503 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 ISL1P61371 349 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 GTDC1Q4AE62 458 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 C6orf141Q5SZD1 244 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 ZNF362Q5T0B9 420 aaPredicted RBP13.75□□□□□ -0.21
NUP98-204ENST00000397004 NADSYN1Q6IA69 706 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 YTHDF1Q9BYJ9 559 aaKnown RBP13.75□□□□□ -0.21
NUP98-204ENST00000397004 ZYG11BQ9C0D3 744 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 PDFQ9HBH1 243 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 VNN3Q9NY84 501 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 CPQQ9Y646 472 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 FAM234BA2RU67 622 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 C17orf102A2RUQ5 167 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 AREL1O15033 823 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 RHOBTB1O94844 696 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 BCL10O95999 233 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 RHOQP17081 205 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 PFKLP17858 780 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 SERINC3Q13530 473 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 BRSK1Q8TDC3 778 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 ZFP90Q8TF47 636 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 NSMCE2Q96MF7 247 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 BDH2Q9BUT1 245 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 OSBPL10Q9BXB5 764 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 TMEFF2Q9UIK5 374 aaPredicted RBP13.75□□□□□ -0.21
NUP98-204ENST00000397004 TSR3Q9UJK0 312 aaKnown RBP13.75□□□□□ -0.21
NUP98-204ENST00000397004 TLR6Q9Y2C9 796 aa13.75□□□□□ -0.21
NUP98-204ENST00000397004 LSM1O15116 133 aaKnown RBP13.74□□□□□ -0.21
NUP98-204ENST00000397004 UROSP10746 265 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 ODC1P11926 461 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 HTR7P34969 479 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms