RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 SIDT2Q8NBJ9 832 aaKnown RBP13.48□□□□□ -0.25
VAPB-202ENST00000395802 RHEBL1Q8TAI7 183 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 STAG3L4Q8TBR4 150 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 BCAS4Q8TDM0 211 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 KCTD4Q8WVF5 259 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 CKAP2Q8WWK9 683 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 KLK6Q92876 244 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 FOXJ1Q92949 421 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 CCDC126Q96EE4 140 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 LINC00615Q96LM1 132 aaPredicted RBP13.48□□□□□ -0.25
VAPB-202ENST00000395802 C1QTNF1Q9BXJ1 281 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 TFB2MQ9H5Q4 396 aaKnown RBP13.48□□□□□ -0.25
VAPB-202ENST00000395802 MBNL1Q9NR56 388 aaKnown RBP13.48□□□□□ -0.25
VAPB-202ENST00000395802 DLGAP2Q9P1A6 1054 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 VCANP13611 3396 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 OR2AG2A6NM03 316 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 SYCE1LA8MT33 242 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 IQCF5A8MTL0 148 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 PLIN3O60664 434 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 KCNJ13O60928 360 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 DNAJC6O75061 913 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 FSBPO95073 299 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 VCLP18206 1134 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 TAC1P20366 129 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 ETV4P43268 484 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 IRF9Q00978 393 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 TIAL1Q01085 375 aaKnown RBP eCLIP13.48□□□□□ -0.25
VAPB-202ENST00000395802 ASPHQ12797 758 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 SYTL3Q4VX76 610 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 ARMC2Q8NEN0 867 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 ELMO1Q92556 727 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 TMEM159Q96B96 161 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 FAM136AQ96C01 138 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 NXNL1Q96CM4 212 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 APOOQ9BUR5 198 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 RABEP2Q9H5N1 569 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 C6orf106Q9H6K1 298 aaPredicted RBP13.48□□□□□ -0.25
VAPB-202ENST00000395802 CD93Q9NPY3 652 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 TMEM216Q9P0N5 145 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 SLC17A7Q9P2U7 560 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 ATXN10Q9UBB4 475 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 NCOR1O75376 2440 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 TMEM221A6NGB7 291 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 C10orf142B7Z368 130 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 M0R296 226 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 LIN7AO14910 233 aaPredicted RBP13.47□□□□□ -0.25
VAPB-202ENST00000395802 MAP3K13O43283 966 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 LAMTOR5O43504 91 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 NUAK1O60285 661 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 FAM107AO95990 144 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 CD1DP15813 335 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 AOAHP28039 575 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 RABIFP47224 123 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 PRKAA2P54646 552 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 KIAA1024LP59773 190 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 PTK2BQ14289 1009 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 LRRTM4Q86VH4 590 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 PLD6Q8N2A8 252 aaKnown RBP13.47□□□□□ -0.25
VAPB-202ENST00000395802 PELI3Q8N2H9 469 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 FSTL5Q8N475 847 aaPredicted RBP13.47□□□□□ -0.25
VAPB-202ENST00000395802 RAB3IL1Q8TBN0 382 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 FUBP1Q96AE4 644 aaKnown RBP13.47□□□□□ -0.25
VAPB-202ENST00000395802 LINGO1Q96FE5 620 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 CHMP6Q96FZ7 201 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 MAGEB18Q96M61 343 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 IGSF5Q9NSI5 407 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 TMCO1Q9UM00 188 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.47□□□□□ -0.25
VAPB-202ENST00000395802 OR1A2Q9Y585 309 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 PLXNB3Q9ULL4 1909 aa13.47□□□□□ -0.25
VAPB-202ENST00000395802 A0A1W2PPC4 97 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 PABPN1LA6NDY0 278 aaKnown RBP13.46□□□□□ -0.25
VAPB-202ENST00000395802 K7ESF4 209 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 CHUKO15111 745 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 KMOO15229 486 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 PROCP04070 461 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 IGHV4-34P06331 123 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 DHRS4L1P0CG22 281 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 CPA3P15088 417 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 ZNF8P17098 575 aaPredicted RBP13.46□□□□□ -0.25
VAPB-202ENST00000395802 IGFALSP35858 605 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 SERPINB4P48594 390 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 THOP1P52888 689 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 KHDC1Q4VXA5 237 aaKnown RBP13.46□□□□□ -0.25
VAPB-202ENST00000395802 TMEM207Q6UWW9 146 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 NEK10Q6ZWH5 1172 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 ADAMTSL2Q86TH1 951 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 CPNE9Q8IYJ1 553 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 ANKRD49Q8WVL7 239 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 KIAA1191Q96A73 305 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 BIRC7Q96CA5 298 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 CCT8L2Q96SF2 557 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 C12orf65Q9H3J6 166 aaKnown RBP13.46□□□□□ -0.25
VAPB-202ENST00000395802 COPG2Q9UBF2 871 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 SLC17A4Q9Y2C5 497 aa13.46□□□□□ -0.25
VAPB-202ENST00000395802 METTL12A8MUP2 240 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 TNFRSF10CO14798 259 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 RAD51BO15315 384 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 H2AFYO75367 372 aaKnown RBP13.46□□□□□ -0.26
VAPB-202ENST00000395802 MYL2P10916 166 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms