RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 TNPO3Q9Y5L0 923 aaKnown RBP25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 MYOFQ9NZM1 2061 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 RAD51BO15315 384 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 DGKAP23743 735 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 IRX1P78414 480 aaPredicted RBP25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 GPRC6AQ5T6X5 926 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 LRRC66Q68CR7 880 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 MACC1Q6ZN28 852 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 TPRG1Q6ZUI0 275 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 GOLGA7Q7Z5G4 137 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 ZBTB2Q8N680 514 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 PDPRQ8NCN5 879 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 PKP2Q99959 881 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 HTATIP2Q9BUP3 242 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 SLC52A3Q9NQ40 469 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 PFDN4Q9NQP4 134 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 C8BP07358 591 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 UQCRBP14927 111 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 C6orf10Q5SRN2 563 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 TMEM126BQ8IUX1 230 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 VCXQ9H320 206 aa25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 NSUN3Q9H649 340 aaKnown RBP25.24■■□□□ 1.63
SMARCD3-203ENST00000392811 OR7A17O14581 309 aa25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 GRM6O15303 877 aa25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 MRPL19P49406 292 aaKnown RBP25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 CCNHP51946 323 aaPredicted RBP25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 GTF2H2Q13888 395 aa25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 TEAD2Q15562 447 aa25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 RARS2Q5T160 578 aaKnown RBP25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 CAPRIN2Q6IMN6 1127 aaKnown RBP25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 GTF2H2CQ6P1K8 395 aa25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 ATP6V1E2Q96A05 226 aa25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 FAM126AQ9BYI3 521 aaPredicted RBP25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 ZDHHC6Q9H6R6 413 aa25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 ELOVL2Q9NXB9 296 aa25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 GMPR2Q9P2T1 348 aaKnown RBP25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 SLC25A13Q9UJS0 675 aa25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 OARD1Q9Y530 152 aa25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 ST14Q9Y5Y6 855 aa25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 SLC4A7Q9Y6M7 1214 aa25.23■■□□□ 1.63
SMARCD3-203ENST00000392811 AGAP14A8MT82 685 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 NEDD8-MDP1E9PL57 170 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 DNAJA2O60884 412 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 GUCA1CO95843 209 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 ARL1P40616 181 aaPredicted RBP25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 IL23RQ5VWK5 629 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 PLPP4Q5VZY2 271 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 DPY19L3Q6ZPD9 716 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 USP45Q70EL2 814 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 ICA1LQ8NDH6 482 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 ASIC4Q96FT7 647 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 DCUN1D1Q96GG9 259 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 TEX37Q96LM6 180 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 HOPXQ9BPY8 73 aaPredicted RBP25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 RIC8BQ9NVN3 520 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 SLCO3A1Q9UIG8 710 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 PTBP2Q9UKA9 531 aaKnown RBP25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 PPIL1Q9Y3C6 166 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 FXYD1O00168 92 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 TAPBPO15533 448 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 RNASEH1O60930 286 aaKnown RBP25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 MOSPD3O75425 235 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 RFPL2O75678 378 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 RNASEH2AO75792 299 aaKnown RBP25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 CAPN1P07384 714 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 LYNP07948 512 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 LHCGRP22888 699 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 PTPN5P54829 565 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 ERVK-8P63133 956 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 GRIK2Q13002 908 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 CARD16Q5EG05 197 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 CCT7Q99832 543 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 C1orf50Q9BV19 199 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 CPEB1Q9BZB8 566 aaKnown RBP25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 BRINP2Q9C0B6 783 aa25.22■■□□□ 1.63
SMARCD3-203ENST00000392811 NME4O00746 187 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 VCLP18206 1134 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 HSPA7P48741 367 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 RHDQ02161 417 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 PTSQ03393 145 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 PHKG1Q16816 387 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 C6orf136Q5SQH8 315 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 Q6ZSR9 355 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 RFLNAQ6ZTI6 216 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 ADGRG2Q8IZP9 1017 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 MINDY1Q8N5J2 469 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 OR4F6Q8NGB9 312 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 METTL6Q8TCB7 284 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 SPDL1Q96EA4 605 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 MCCC1Q96RQ3 725 aaPredicted RBP25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 APOL5Q9BWW9 433 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 BBS2Q9BXC9 721 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 ABCD2Q9UBJ2 740 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 IRAK3Q9Y616 596 aa25.21■■□□□ 1.63
SMARCD3-203ENST00000392811 UGT2B4P06133 528 aa25.2■■□□□ 1.63
SMARCD3-203ENST00000392811 ZFP36L2P47974 494 aaKnown RBP25.2■■□□□ 1.63
SMARCD3-203ENST00000392811 HTR6P50406 440 aa25.2■■□□□ 1.63
SMARCD3-203ENST00000392811 EPHA5P54756 1037 aa25.2■■□□□ 1.63
SMARCD3-203ENST00000392811 MAP7D1Q3KQU3 841 aa25.2■■□□□ 1.63
SMARCD3-203ENST00000392811 COQ5Q5HYK3 327 aa25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms