RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 TOMM70O94826 608 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 LUC7L3O95232 432 aaKnown RBP-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 IGHV4-59P01825 116 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 CGB3P0DN86 165 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 CGB7P0DN87 165 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 PEPDP12955 493 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 ANPEPP15144 967 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 CDK11BP21127 795 aaKnown RBP-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 YWHAQP27348 245 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 CHRNA7P36544 502 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 KIR2DS2P43631 304 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 OAZ1P54368 228 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 MTF1Q14872 753 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZACNQ401N2 412 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 CHRFAM7AQ494W8 412 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 CT47A1Q5JQC4 288 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 C9orf129Q5T035 196 aaKnown RBP-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 PAMR1Q6UXH9 720 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 SLC36A4Q6YBV0 504 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 FAM131BQ86XD5 332 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZNF786Q8N393 782 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 Q8NDZ9 215 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 RASSF8Q8NHQ8 419 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 FLVCR1-AS1Q8TAF5 88 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 OTULINQ96BN8 352 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 PRMT6Q96LA8 375 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 FNBP1Q96RU3 617 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 ARID3AQ99856 593 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 VCXQ9H320 206 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 ATP6V0A4Q9HBG4 840 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 GPN1Q9HCN4 374 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 WDR6Q9NNW5 1121 aaKnown RBP-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 CNGB3Q9NQW8 809 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 CYSLTR2Q9NS75 346 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 TYW1Q9NV66 732 aaKnown RBP-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 ANKRD10Q9NXR5 420 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 MID2Q9UJV3 735 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 ANGPTL3Q9Y5C1 460 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 CD2APQ9Y5K6 639 aa-0.86□□□□□ -2.55
RNU6-540P-201ENST00000384622 RTTNQ86VV8 2226 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 DIDO1Q9BTC0 2240 aaKnown RBP-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 ALMS1Q8TCU4 4167 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 DNAH3Q8TD57 4116 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 MUC21A0A0G2JKD1 596 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 MUC21A0A140T8X8 626 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 K7ENM7 598 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 PLK4O00444 970 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 DTNBO60941 627 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 PDE9AO76083 593 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 RGS11O94810 467 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 IGKV1-39P01597 117 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 IGLV1-47P01700 117 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 IGKV1D-39P04432 117 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 BTF3P20290 206 aaKnown RBP-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 CYP2A7P20853 494 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 IBSPP21815 317 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 CDH5P33151 784 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 MAGEA11P43364 429 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 KHKP50053 298 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZNF75DP51815 510 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 STX17P56962 302 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 ADARB1P78563 741 aaKnown RBP-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 PLIN5Q00G26 463 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 CDR2Q01850 454 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZNF543Q08ER8 600 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 GPS1Q13098 491 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 MTMR1Q13613 665 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 SPCS2Q15005 226 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 MUC21Q5SSG8 566 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 PGM2L1Q6PCE3 622 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 SASS6Q6UVJ0 657 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 SHISA6Q6ZSJ9 500 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 MON1AQ86VX9 555 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 LACC1Q8IV20 430 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 PHC2Q8IXK0 858 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 GALNT15Q8N3T1 639 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 TMEM57Q8N5G2 664 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 UBR7Q8N806 425 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 PCYOX1LQ8NBM8 494 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 SLC30A7Q8NEW0 376 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZNF397Q8NF99 534 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 NINJ1Q92982 152 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 ERGIC1Q969X5 290 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 RNF183Q96D59 192 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 CDK5RAP3Q96JB5 506 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZNF578Q96N58 590 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZNF2Q9BSG1 426 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 TDRD1Q9BXT4 1180 aaKnown RBP-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 CYSTM1Q9H1C7 97 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 KIR3DX1Q9H7L2 352 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 CLEC5AQ9NY25 188 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 STAP2Q9UGK3 403 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 PHF11Q9UIL8 331 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 CSPG4Q6UVK1 2322 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 CSMD1Q96PZ7 3565 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 POLEQ07864 2286 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 ADGRG4Q8IZF6 3080 aa-0.87□□□□□ -2.55
RNU6-540P-201ENST00000384622 ANK2Q01484 3957 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 WASHC2CQ9Y4E1 1318 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 DNAH2Q9P225 4427 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms