RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 ITGB6P18564 788 aa12.75□□□□□ -0.37
RPAIN-202ENST00000381208 CAPZBP47756 277 aa12.75□□□□□ -0.37
RPAIN-202ENST00000381208 ATP5OP48047 213 aa12.75□□□□□ -0.37
RPAIN-202ENST00000381208 PRPSAP1Q14558 356 aa12.75□□□□□ -0.37
RPAIN-202ENST00000381208 SEPT7Q16181 437 aaKnown RBP12.75□□□□□ -0.37
RPAIN-202ENST00000381208 PLA2G4EQ3MJ16 856 aa12.75□□□□□ -0.37
RPAIN-202ENST00000381208 ATG14Q6ZNE5 492 aa12.75□□□□□ -0.37
RPAIN-202ENST00000381208 C11orf96Q7Z7L8 435 aa12.75□□□□□ -0.37
RPAIN-202ENST00000381208 SLC25A41Q8N5S1 370 aa12.75□□□□□ -0.37
RPAIN-202ENST00000381208 ZFPM2Q8WW38 1151 aa12.75□□□□□ -0.37
RPAIN-202ENST00000381208 OXNAD1Q96HP4 312 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-202ENST00000381208 GBA3Q9H227 469 aa12.75□□□□□ -0.37
RPAIN-202ENST00000381208 SIDT1Q9NXL6 827 aaKnown RBP12.75□□□□□ -0.37
RPAIN-202ENST00000381208 CCDC66A2RUB6 948 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 C5orf60A6NFR6 353 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 POP7O75817 140 aaKnown RBP12.74□□□□□ -0.37
RPAIN-202ENST00000381208 RASSF9O75901 435 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 DLGAP3O95886 979 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 MT-ND3P03897 115 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 BRAFP15056 766 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 TYRP1P17643 537 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 LPOP22079 712 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-202ENST00000381208 CTNNA2P26232 953 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 RPL10P27635 214 aaKnown RBP12.74□□□□□ -0.37
RPAIN-202ENST00000381208 PTPN7P35236 360 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 KCNC4Q03721 635 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 FOXM1Q08050 763 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 NOMO1Q15155 1222 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 CHRNA6Q15825 494 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 KHDC1Q4VXA5 237 aaKnown RBP12.74□□□□□ -0.37
RPAIN-202ENST00000381208 GPRC6AQ5T6X5 926 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 FAM151BQ6UXP7 276 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 B4GALNT4Q76KP1 1039 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 PRICKLE2Q7Z3G6 844 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 BPHLQ86WA6 291 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-202ENST00000381208 TMTC1Q8IUR5 882 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 CDKL3Q8IVW4 592 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-202ENST00000381208 HEXDCQ8WVB3 486 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 KLHL6Q8WZ60 621 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 UBXN4Q92575 508 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 TGM7Q96PF1 710 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 FCRL4Q96PJ5 515 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 PANX2Q96RD6 677 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 CD180Q99467 661 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 CTRCQ99895 268 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 CLMPQ9H6B4 373 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 OGFRQ9NZT2 677 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 FEZ2Q9UHY8 353 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-202ENST00000381208 TMPRSS11EQ9UL52 423 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 ACSL5Q9ULC5 683 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 PCDHA3Q9Y5H8 950 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 SLC30A1Q9Y6M5 507 aa12.74□□□□□ -0.37
RPAIN-202ENST00000381208 WISP1O95388 367 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 RALBP11234 206 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 MSH3P20585 1137 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 FECHP22830 423 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 CTNNA1P35221 906 aaKnown RBP12.73□□□□□ -0.37
RPAIN-202ENST00000381208 STAT5AP42229 794 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 CHRNA4P43681 627 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 CSRP3P50461 194 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 DRG2P55039 364 aaKnown RBP12.73□□□□□ -0.37
RPAIN-202ENST00000381208 GFERP55789 205 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 CYP4F2P78329 520 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 ADCY2Q08462 1091 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 GPR18Q14330 331 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 LLGL1Q15334 1064 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 TAF1AQ15573 450 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-202ENST00000381208 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.73□□□□□ -0.37
RPAIN-202ENST00000381208 CACHD1Q5VU97 1274 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 TMEM220Q6QAJ8 160 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 KMT5CQ86Y97 462 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 TXLNBQ8N3L3 684 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 ZNF398Q8TD17 642 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 ULBP3Q9BZM4 244 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 APMAPQ9HDC9 416 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 SEMA5BQ9P283 1151 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 KCND3Q9UK17 655 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 PCDHB3Q9Y5E6 796 aa12.73□□□□□ -0.37
RPAIN-202ENST00000381208 LOC101059948A0A1B0GTJ6 334 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 GOLGA6L3A6NEY3 463 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 OR52A4PA6NMU1 304 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 BTNL10A8MVZ5 291 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 UGT1A9O60656 530 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 TJP3O95049 919 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 NDUFA10O95299 355 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 CRTAMO95727 393 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 RECKO95980 971 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 FGF5P12034 268 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 NELFEP18615 380 aaKnown RBP12.72□□□□□ -0.37
RPAIN-202ENST00000381208 UGT1A6P19224 532 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 TCN2P20062 427 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 UGT1A1P22309 533 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 UGT1A4P22310 534 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 RBL1P28749 1068 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 AKT1P31749 480 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 HADHAP40939 763 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 NAP1L1P55209 391 aaKnown RBP12.72□□□□□ -0.37
RPAIN-202ENST00000381208 POLE2P56282 527 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 RWDD2BP57060 319 aa12.72□□□□□ -0.37
RPAIN-202ENST00000381208 CDC20Q12834 499 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms