RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 ADARP55265 1226 aaKnown RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 EIF3BP55884 814 aaKnown RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 EFTUD2Q15029 972 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMN1-202ENST00000380707 AASDHQ4L235 1098 aaPredicted RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 CTSL3PQ5NE16 218 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 KANSL1Q7Z3B3 1105 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 GATAD2AQ86YP4 633 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 GABPB2Q8TAK5 448 aaPredicted RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 GPBAR1Q8TDU6 330 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 LMX1AQ8TE12 382 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 FUT8Q9BYC5 575 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 EPB41L4BQ9H329 900 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 TMEM9BQ9NQ34 198 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 SPASTQ9UBP0 616 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 GULP1Q9UBP9 304 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 PTPRZ1P23471 2315 aaPredicted RBP12.46□□□□□ -0.41
SMN1-202ENST00000380707 YKT6O15498 198 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 RIPK2O43353 540 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 TUBBP07437 444 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 OR56A5P0C7T3 313 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 ZNF883P0CG24 379 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 LRP8Q14114 963 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 ELOCQ15369 112 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 INSCQ1MX18 579 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 ZNF549Q6P9A3 640 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 SLC30A9Q6PML9 568 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 STRA8Q7Z7C7 330 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 TAF8Q7Z7C8 310 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 GALNT7Q86SF2 657 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 AMZ2Q86W34 360 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 SLC26A11Q86WA9 606 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 LRRC6Q86X45 466 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 FSTL5Q8N475 847 aaPredicted RBP12.46□□□□□ -0.42
SMN1-202ENST00000380707 UHMK1Q8TAS1 419 aaKnown RBP12.46□□□□□ -0.42
SMN1-202ENST00000380707 LINC00615Q96LM1 132 aaPredicted RBP12.46□□□□□ -0.42
SMN1-202ENST00000380707 CCM2Q9BSQ5 444 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 MCMBPQ9BTE3 642 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 ACSS3Q9H6R3 686 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 KLC4Q9NSK0 619 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 KCNK6Q9Y257 313 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 DNAJC16Q9Y2G8 782 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 DNMT3AQ9Y6K1 912 aaPredicted RBP12.46□□□□□ -0.42
SMN1-202ENST00000380707 DCHS1Q96JQ0 3298 aa12.46□□□□□ -0.42
SMN1-202ENST00000380707 PIEZO1Q92508 2521 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 PRR19A6NJB7 356 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 C4orf47A7E2U8 309 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 LMO7DNF2Z398 122 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 YY2O15391 372 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 CTIFO43310 598 aaKnown RBP12.45□□□□□ -0.42
SMN1-202ENST00000380707 PCDHGA12O60330 932 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 FOXD2O60548 495 aaPredicted RBP12.45□□□□□ -0.42
SMN1-202ENST00000380707 ESR1P03372 595 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 GIMD1P0DJR0 217 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 ITGB6P18564 788 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 PBLDP30039 288 aaPredicted RBP12.45□□□□□ -0.42
SMN1-202ENST00000380707 CD151P48509 253 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 ARHGAP8P85298 464 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 ILF3Q12906 894 aaKnown RBP eCLIP12.45□□□□□ -0.42
SMN1-202ENST00000380707 SLC29A2Q14542 456 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 ZNF658BQ4V348 819 aaPredicted RBP12.45□□□□□ -0.42
SMN1-202ENST00000380707 PTRHD1Q6GMV3 140 aaKnown RBP12.45□□□□□ -0.42
SMN1-202ENST00000380707 EMBQ6PCB8 327 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 XKR5Q6UX68 686 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 NAPRTQ6XQN6 538 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 FAM83HQ6ZRV2 1179 aaPredicted RBP12.45□□□□□ -0.42
SMN1-202ENST00000380707 CTAGE3PQ8IX95 158 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 KRT222Q8N1A0 295 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 PPM1NQ8N819 430 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 OR2L2Q8NH16 312 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 LKAAEAR1Q8TD35 194 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 CDKL2Q92772 493 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 CYTH2Q99418 400 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 TIMM29Q9BSF4 260 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 GSDMCQ9BYG8 508 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 SPATS2LQ9NUQ6 558 aaKnown RBP12.45□□□□□ -0.42
SMN1-202ENST00000380707 FAM8A1Q9UBU6 413 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 GNPTGQ9UJJ9 305 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 CSNK1G3Q9Y6M4 447 aa12.45□□□□□ -0.42
SMN1-202ENST00000380707 PIKFYVEQ9Y2I7 2098 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 A0A087WUV0 522 aaPredicted RBP12.44□□□□□ -0.42
SMN1-202ENST00000380707 MGAT4DA6NG13 374 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 QSOX1O00391 747 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 FFAR2O15552 330 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 NIPSNAP2O75323 286 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 FAM155BO75949 473 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 TRIM16O95361 564 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 ABHD2P08910 425 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 PKMP14618 531 aaKnown RBP12.44□□□□□ -0.42
SMN1-202ENST00000380707 ACTR1BP42025 376 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 ACTR1AP61163 376 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 NFE2L1Q14494 772 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 UAP1Q16222 522 aaPredicted RBP12.44□□□□□ -0.42
SMN1-202ENST00000380707 DEFB133Q30KQ1 61 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 UAP1L1Q3KQV9 507 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 DBX2Q6ZNG2 339 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 GKN2Q86XP6 184 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 CFAP206Q8IYR0 622 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 KIAA2013Q8IYS2 634 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 LILRA3Q8N6C8 439 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms