RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 TBC1D30Q9Y2I9 924 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 NFKBIAP25963 317 aa16.83■□□□□ 0.29
RXRB-201ENST00000374680 PHKG1Q16816 387 aa16.83■□□□□ 0.29
RXRB-201ENST00000374680 DET1Q7L5Y6 550 aa16.83■□□□□ 0.29
RXRB-201ENST00000374680 DNAJB7Q7Z6W7 309 aaPredicted RBP16.83■□□□□ 0.29
RXRB-201ENST00000374680 CCM2LQ9NUG4 571 aaPredicted RBP16.83■□□□□ 0.29
RXRB-201ENST00000374680 AIG1Q9NVV5 245 aa16.83■□□□□ 0.29
RXRB-201ENST00000374680 ZNF711Q9Y462 761 aa16.83■□□□□ 0.29
RXRB-201ENST00000374680 UPK3BL1B0FP48 263 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 UPK3BL2E5RIL1 263 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 FOXD2O60548 495 aaPredicted RBP16.83■□□□□ 0.28
RXRB-201ENST00000374680 ZNF23P17027 643 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 HMOX2P30519 316 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 RPL38P63173 70 aaKnown RBP16.83■□□□□ 0.28
RXRB-201ENST00000374680 PYCR3Q53H96 274 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 SLC22A15Q8IZD6 547 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 ADGRG2Q8IZP9 1017 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 RMND5BQ96G75 393 aaPredicted RBP16.83■□□□□ 0.28
RXRB-201ENST00000374680 MRPS26Q9BYN8 205 aaKnown RBP16.83■□□□□ 0.28
RXRB-201ENST00000374680 CLPBQ9H078 707 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 RPF2Q9H7B2 306 aaKnown RBP16.83■□□□□ 0.28
RXRB-201ENST00000374680 DOCK6Q96HP0 2047 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 PRMT5O14744 637 aaPredicted RBP16.83■□□□□ 0.28
RXRB-201ENST00000374680 PSMD8P48556 350 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 IST1P53990 364 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 LSAMPQ13449 338 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 TTC33Q6PID6 262 aaPredicted RBP16.83■□□□□ 0.28
RXRB-201ENST00000374680 NCEH1Q6PIU2 408 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 GOLGA7Q7Z5G4 137 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 ADGRG5Q8IZF4 528 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 NAT16Q8N8M0 369 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 HIC2Q96JB3 615 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 OSBPL11Q9BXB4 747 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 LTB4R2Q9NPC1 389 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 IL17CQ9P0M4 197 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 KLQ9UEF7 1012 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 YIPF1Q9Y548 306 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 PCDHA9Q9Y5H5 950 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 CPQQ9Y646 472 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 COMMD3-BMI1R4GMX3 469 aa16.83■□□□□ 0.28
RXRB-201ENST00000374680 SMIM31A0A1B0GVY4 71 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 PENKP01210 267 aaPredicted RBP16.82■□□□□ 0.28
RXRB-201ENST00000374680 STK19P49842 368 aaPredicted RBP16.82■□□□□ 0.28
RXRB-201ENST00000374680 NKX3-2P78367 333 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 FAM126BQ8IXS8 530 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 MINDY1Q8N5J2 469 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 SLC2A11Q9BYW1 496 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 LHX3Q9UBR4 397 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 MYRFQ9Y2G1 1151 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 A0A1W2PQ67 120 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 KANSL1LA0AUZ9 987 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 SH3BGRLO75368 114 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 H6PDO95479 791 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 HSPA13P48723 471 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 CLCN7P51798 805 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 ELAVL2Q12926 359 aaKnown RBP16.82■□□□□ 0.28
RXRB-201ENST00000374680 ARHGEF7Q14155 803 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 NHSL2Q5HYW2 709 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 TBPL2Q6SJ96 375 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 SLC52A3Q9NQ40 469 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 ARIH1Q9Y4X5 557 aaPredicted RBP16.82■□□□□ 0.28
RXRB-201ENST00000374680 FNDC1Q4ZHG4 1894 aaPredicted RBP16.82■□□□□ 0.28
RXRB-201ENST00000374680 MYOFQ9NZM1 2061 aa16.82■□□□□ 0.28
RXRB-201ENST00000374680 PFDN6O15212 129 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 FFAR2O15552 330 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 AP1G1O43747 822 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 MLYCDO95822 493 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 B3GALT4O96024 378 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 CKMP06732 381 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 ZFP36L2P47974 494 aaKnown RBP16.81■□□□□ 0.28
RXRB-201ENST00000374680 ATP4BP51164 291 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 GTF2H2Q13888 395 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 GTF2H2CQ6P1K8 395 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 KRTCAP2Q8N6L1 136 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 FBXO30Q8TB52 745 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 FIG4Q92562 907 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 GFM2Q969S9 779 aaKnown RBP16.81■□□□□ 0.28
RXRB-201ENST00000374680 BIRC7Q96CA5 298 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 THUMPD3Q9BV44 507 aaKnown RBP16.81■□□□□ 0.28
RXRB-201ENST00000374680 ZNF696Q9H7X3 374 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 POPDC3Q9HBV1 291 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 ELOVL2Q9NXB9 296 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 ANKRD36A6QL64 1941 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 BBIP1A8MTZ0 92 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 OR7A17O14581 309 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 MTX2O75431 263 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 SNAP29O95721 258 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 GSNP06396 782 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 HOXB8P17481 243 aaPredicted RBP16.81■□□□□ 0.28
RXRB-201ENST00000374680 TNK2Q07912 1038 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 LAPTM5Q13571 262 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 CPSF6Q16630 551 aaKnown RBP eCLIP16.81■□□□□ 0.28
RXRB-201ENST00000374680 ALG1LQ6GMV1 187 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 GLYATQ6IB77 296 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 ZNF461Q8TAF7 563 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 PEX13Q92968 403 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 PYCR2Q96C36 320 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 DCUN1D5Q9BTE7 237 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 TTLL2Q9BWV7 592 aa16.81■□□□□ 0.28
RXRB-201ENST00000374680 ZFYVE1Q9HBF4 777 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms