RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 CXorf57Q6NSI4 855 aaKnown RBP10.68□□□□□ -0.7
CXCL12-203ENST00000374429 CHST15Q7LFX5 561 aaPredicted RBP10.68□□□□□ -0.7
CXCL12-203ENST00000374429 LILRA3Q8N6C8 439 aaPredicted RBP10.68□□□□□ -0.7
CXCL12-203ENST00000374429 RNF145Q96MT1 663 aa10.68□□□□□ -0.7
CXCL12-203ENST00000374429 GRIP2Q9C0E4 1043 aa10.68□□□□□ -0.7
CXCL12-203ENST00000374429 ASAH2Q9NR71 780 aa10.68□□□□□ -0.7
CXCL12-203ENST00000374429 MTRRQ9UBK8 725 aa10.68□□□□□ -0.7
CXCL12-203ENST00000374429 TRAFD1O14545 582 aaPredicted RBP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 KDELR3O43731 214 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 MAGEC1O60732 1142 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 SOD2P04179 222 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 SERPIND1P05546 499 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 EEF1B2P24534 225 aaKnown RBP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 IRS1P35568 1242 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 HERVK_113P63132 956 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 STX5Q13190 355 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 PLCL1Q15111 1095 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 TMTC4Q5T4D3 741 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 ANKRD26P1Q6NSI1 321 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 AFTPHQ6ULP2 937 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 C11orf96Q7Z7L8 435 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 SYVN1Q86TM6 617 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 OFCC1Q8IZS5 231 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 RP9Q8TA86 221 aaKnown RBP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 MTERF1Q99551 399 aaKnown RBP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 ERVK-6Q9BXR3 956 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 DDX18Q9NVP1 670 aaKnown RBP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 ASB3Q9Y575 518 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 NPIPB15A6NHN6 443 aaPredicted RBP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 EIF3FO00303 357 aaPredicted RBP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 GNGT2O14610 69 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 PRMT5O14744 637 aaPredicted RBP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 ITGALP20701 1170 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 CST5P28325 142 aaPredicted RBP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 AQP1P29972 269 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 HOXD12P35452 270 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 CCR2P41597 374 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 MAGEA11P43364 429 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 PREPP48147 710 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 PPP3CCP48454 512 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 MAPKAPK2P49137 400 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 TNK2Q07912 1038 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 STARD3Q14849 445 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 TGFBIQ15582 683 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 TBCELQ5QJ74 424 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 CYS1Q717R9 158 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 CLEC4FQ8N1N0 589 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 RTKNQ9BST9 563 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 GLYATL1P3A0A0U1RQE8 302 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 GSTA4O15217 222 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 RNASEH2AO75792 299 aaKnown RBP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 ZNF135P52742 658 aaPredicted RBP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 CDH15P55291 814 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 PRKG2Q13237 762 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 LAPTM5Q13571 262 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 CRY1Q16526 586 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 ARSIQ5FYB1 569 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 SLC22A9Q8IVM8 553 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 INTS7Q9NVH2 962 aaKnown RBP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 POLG2Q9UHN1 485 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 PSMD13Q9UNM6 376 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 LRCH1Q9Y2L9 728 aa10.67□□□□□ -0.7
CXCL12-203ENST00000374429 TDRD15B5MCY1 1934 aaKnown RBP10.67□□□□□ -0.7
CXCL12-203ENST00000374429 LOC285095A0A1B0GVY8 99 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 EPCAMP16422 314 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 HLA-FP30511 346 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 KPNA1P52294 538 aaPredicted RBP10.66□□□□□ -0.7
CXCL12-203ENST00000374429 UAP1L1Q3KQV9 507 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 ATP13A5Q4VNC0 1218 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 ATP6AP1LQ52LC2 224 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 RARS2Q5T160 578 aaKnown RBP10.66□□□□□ -0.7
CXCL12-203ENST00000374429 TMEM53Q6P2H8 277 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 CRTC3Q6UUV7 619 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 GPRIN3Q6ZVF9 776 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 RETREG3Q86VR2 466 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 SLC44A2Q8IWA5 706 aaPredicted RBP10.66□□□□□ -0.7
CXCL12-203ENST00000374429 PDZD8Q8NEN9 1154 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 ACTRT2Q8TDY3 377 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 FUBP1Q96AE4 644 aaKnown RBP10.66□□□□□ -0.7
CXCL12-203ENST00000374429 DCUN1D1Q96GG9 259 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 TRAPPC9Q96Q05 1148 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 NRTNQ99748 197 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 IL26Q9NPH9 171 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 SCHIP1Q9P0W5 487 aaPredicted RBP10.66□□□□□ -0.7
CXCL12-203ENST00000374429 VTI1BQ9UEU0 232 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 RNF11Q9Y3C5 154 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 CCDC154A6NI56 674 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 TTC34A8MYJ7 566 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 LEFTY2O00292 366 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 IL1BP01584 269 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 CLTBP09497 229 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 VCLP18206 1134 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 CAPN3P20807 821 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 ETV3P41162 512 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 YAP1P46937 504 aaKnown RBP10.66□□□□□ -0.7
CXCL12-203ENST00000374429 TTPAP49638 278 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 METAP1P53582 386 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 ACOX1Q15067 660 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 GCNT7Q6ZNI0 430 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms