RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 RETREG3Q86VR2 466 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 CENPLQ8N0S6 344 aaPredicted RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 GLMNQ92990 594 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 BTN2A3PQ96KV6 586 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 IL12RB2Q99665 862 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 ZYG11BQ9C0D3 744 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 GIMAP2Q9UG22 337 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 FZD10Q9ULW2 581 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 MRPS23Q9Y3D9 190 aaKnown RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 ARPC2O15144 300 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 FGF10O15520 208 aaPredicted RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 SEC14L2O76054 403 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 GJB5O95377 273 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 NADKO95544 446 aaPredicted RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 PIRTP0C851 137 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 NDUFA5Q16718 116 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 PIWIL4Q7Z3Z4 852 aaKnown RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 R3HCC1LQ7Z5L2 792 aaKnown RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 C14orf80Q86SX3 495 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 YAF2Q8IY57 180 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 HS6ST3Q8IZP7 471 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 PSMA8Q8TAA3 256 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 DNAJB14Q8TBM8 379 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 POF1BQ8WVV4 589 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 TRIM43Q96BQ3 446 aaPredicted RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 DUS3LQ96G46 650 aaKnown RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 ELMO2Q96JJ3 720 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 ATP13A3Q9H7F0 1226 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 SYNDIG1Q9H7V2 258 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 TNFRSF12AQ9NP84 129 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 ANKRD6Q9Y2G4 727 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 SNX5Q9Y5X3 404 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 LCTP09848 1927 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 A0A0J9YYE9 177 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 AQP12BA6NM10 295 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 AP3B1O00203 1094 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 CPNE6O95741 557 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 HOXD11P31277 338 aaPredicted RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 AKT1P31749 480 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 MAGEA11P43364 429 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 FRG1Q14331 258 aaKnown RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 CLPPQ16740 277 aaPredicted RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 AKAP14Q86UN6 197 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 CUZD1Q86UP6 607 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 PSTKQ8IV42 348 aaKnown RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 AQP12AQ8IXF9 295 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 TMEM151AQ8N4L1 468 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 ARL14EPQ8N8R7 260 aaPredicted RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 TRPV3Q8NET8 790 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 PNPT1Q8TCS8 783 aaKnown RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 FEM1CQ96JP0 617 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 SLC45A3Q96JT2 553 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 RNF145Q96MT1 663 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 GPN2Q9H9Y4 310 aaPredicted RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 EIF2B3Q9NR50 452 aaKnown RBP11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 ABCB10Q9NRK6 738 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 ANKMY1Q9P2S6 941 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 SCML2Q9UQR0 700 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 RWDD3Q9Y3V2 267 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 RAD54BQ9Y620 910 aa11.07□□□□□ -0.64
RPRD1B-201ENST00000373433 SCN10AQ9Y5Y9 1956 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 TRAV19A0A0A6YYK7 116 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 HACD1B0YJ81 288 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 ACOX3O15254 700 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 DLGAP3O95886 979 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 STMN1P16949 149 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 SHMT2P34897 504 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 PKDCCQ504Y2 493 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 FAM45BPQ6NSW5 357 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 PLEKHG7Q6ZR37 379 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 ZC3HC1Q86WB0 502 aaKnown RBP11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 DENND6AQ8IWF6 608 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 ADGRG5Q8IZF4 528 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 FAM45AQ8TCE6 357 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 MAELQ96JY0 434 aaKnown RBP11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 C1QTNF1Q9BXJ1 281 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 OSBPL2Q9H1P3 480 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 ATP13A1Q9HD20 1204 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 ZFC3H1O60293 1989 aaKnown RBP11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 ANKRD34BA5PLL1 514 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 TRIM64A6NGJ6 449 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 TEX28O15482 410 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 B4GALT3O60512 393 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 ABCB7O75027 752 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 PCNAP12004 261 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 GJA1P17302 382 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 RENBPP51606 427 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 SGO1Q5FBB7 561 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 ATAD3BQ5T9A4 648 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 NAPEPLDQ6IQ20 393 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 OR7A2PQ8NGA2 310 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 CALML6Q8TD86 181 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.06□□□□□ -0.647e-7■■■■■ 41.8
RPRD1B-201ENST00000373433 GPR22Q99680 433 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 NMUR1Q9HB89 426 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 GKN1Q9NS71 199 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 RCOR3Q9P2K3 495 aaPredicted RBP11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 NME7Q9Y5B8 376 aa11.06□□□□□ -0.64
RPRD1B-201ENST00000373433 PER2O15055 1255 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms