RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 KCTD3Q9Y597 815 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 J3KR12 359 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 PLOD2O00469 737 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 MATN4O95460 622 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 CNPP09543 421 aaKnown RBP11.3□□□□□ -0.6
PTCH2-201ENST00000372192 IDH2P48735 452 aaKnown RBP11.3□□□□□ -0.6
PTCH2-201ENST00000372192 PRIM2P49643 509 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 BMXP51813 675 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 TPTEP56180 551 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 FAM174BQ3ZCQ3 159 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 TIGD5Q53EQ6 642 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 RHEBL1Q8TAI7 183 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 EMID1Q96A84 441 aaPredicted RBP11.3□□□□□ -0.6
PTCH2-201ENST00000372192 DACT3Q96B18 629 aaPredicted RBP11.3□□□□□ -0.6
PTCH2-201ENST00000372192 ERLEC1Q96DZ1 483 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 PGAP3Q96FM1 320 aaPredicted RBP11.3□□□□□ -0.6
PTCH2-201ENST00000372192 SDR39U1Q9NRG7 319 aaPredicted RBP11.3□□□□□ -0.6
PTCH2-201ENST00000372192 ADPRHL2Q9NX46 363 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 NUDT4Q9NZJ9 180 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 PCDHGB5Q9Y5G0 923 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 LINC00854A0A1B0GVQ3 168 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 SAGE2PA6NJ88 616 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 S1PR4O95977 384 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 C1RP00736 705 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 KRT20P35900 424 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 HALP42357 657 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 CBLBQ13191 982 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 TIMM50Q3ZCQ8 353 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 ZNF789Q5FWF6 425 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 GPRIN1Q7Z2K8 1008 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 GPR142Q7Z601 462 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 ZNF605Q86T29 641 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 CPNE9Q8IYJ1 553 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 CDKN2AIPNLQ96HQ2 116 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 ITCHQ96J02 903 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 RASSF1Q9NS23 344 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 ZNHIT2Q9UHR6 403 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 DUSP12Q9UNI6 340 aa11.3□□□□□ -0.6
PTCH2-201ENST00000372192 LCHNA4D1U4 455 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 RFXANKO14593 260 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 PRMT5O14744 637 aaPredicted RBP11.29□□□□□ -0.6
PTCH2-201ENST00000372192 RPLP2P05387 115 aaKnown RBP11.29□□□□□ -0.6
PTCH2-201ENST00000372192 SEPHS1P49903 392 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 DGKQP52824 942 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 CDKN2DP55273 166 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 NDUFA5Q16718 116 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 C6orf141Q5SZD1 244 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 NANOGNBQ7Z5D8 188 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 SLC15A4Q8N697 577 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 MYDGFQ969H8 173 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 ITPKCQ96DU7 683 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 FEM1AQ9BSK4 669 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 C11orf84Q9BUA3 381 aaPredicted RBP11.29□□□□□ -0.6
PTCH2-201ENST00000372192 KAT8Q9H7Z6 458 aaKnown RBP11.29□□□□□ -0.6
PTCH2-201ENST00000372192 LRTM1Q9HBL6 345 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 PGAP2Q9UHJ9 254 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 BTBD3Q9Y2F9 522 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 ADAMTSL1Q8N6G6 1762 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 XIRP1Q702N8 1843 aaKnown RBP11.29□□□□□ -0.6
PTCH2-201ENST00000372192 A0A1B0GTW7 788 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 TTC24A2A3L6 582 aaPredicted RBP11.29□□□□□ -0.6
PTCH2-201ENST00000372192 CDC7O00311 574 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 PRKD3O94806 890 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 ANXA5P08758 320 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 OXTRP30559 389 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 PPP1R8Q12972 351 aaKnown RBP11.29□□□□□ -0.6
PTCH2-201ENST00000372192 CPSF6Q16630 551 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTCH2-201ENST00000372192 PM20D1Q6GTS8 502 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 SULT1C3Q6IMI6 304 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 ZCCHC8Q6NZY4 707 aaKnown RBP11.29□□□□□ -0.6
PTCH2-201ENST00000372192 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 DCDC5Q6ZRR9 648 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 NEK10Q6ZWH5 1172 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 PELI3Q8N2H9 469 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 C2orf69Q8N8R5 385 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 GLB1L3Q8NCI6 653 aaPredicted RBP11.29□□□□□ -0.6
PTCH2-201ENST00000372192 CLHC1Q8NHS4 586 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 DERL2Q9GZP9 239 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 AIG1Q9NVV5 245 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 IKZF3Q9UKT9 509 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 HS3ST4Q9Y661 456 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 LOC100130705A0A1B0GUX0 176 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 LRRC14BA6NHZ5 514 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 PRKCGP05129 697 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 FGF4P08620 206 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 RXRGP48443 463 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 DMPKQ09013 629 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 TUSC3Q13454 348 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 ZBTB6Q15916 424 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 Q6ZNX1 250 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 DET1Q7L5Y6 550 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 NAT16Q8N8M0 369 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 CDK15Q96Q40 435 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 SMOC2Q9H3U7 446 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 SMURF2Q9HAU4 748 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 POPDC3Q9HBV1 291 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 TMEM161AQ9NX61 479 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 ARL15Q9NXU5 204 aa11.29□□□□□ -0.6
PTCH2-201ENST00000372192 CAB39Q9Y376 341 aaPredicted RBP11.29□□□□□ -0.6
PTCH2-201ENST00000372192 FOCADQ5VW36 1801 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms