RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 CDC6Q99741 560 aa15.7■□□□□ 0.1
PFDN4-201ENST00000371419 TMBIM4Q9HC24 238 aa15.7■□□□□ 0.1
PFDN4-201ENST00000371419 NFS1Q9Y697 457 aa15.7■□□□□ 0.1
PFDN4-201ENST00000371419 TEX264Q9Y6I9 313 aa15.7■□□□□ 0.1
PFDN4-201ENST00000371419 FAM169AQ9Y6X4 670 aa15.7■□□□□ 0.1
PFDN4-201ENST00000371419 OR2AG2A6NM03 316 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 ATP1B2P14415 290 aaPredicted RBP15.69■□□□□ 0.1
PFDN4-201ENST00000371419 ZNF7P17097 686 aaPredicted RBP15.69■□□□□ 0.1
PFDN4-201ENST00000371419 ACTR1BP42025 376 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 NSG1P42857 185 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 TTPAP49638 278 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 ACTR1AP61163 376 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 IFFO1Q0D2I5 559 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 SEMA3AQ14563 771 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 CRYMQ14894 314 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 LONRF1Q17RB8 773 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 INSCQ1MX18 579 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 SPANXN3Q5MJ09 141 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 HP1BP3Q5SSJ5 553 aaPredicted RBP15.69■□□□□ 0.1
PFDN4-201ENST00000371419 C6orf132Q5T0Z8 1188 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 MRNIPQ6NTE8 343 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 ZCCHC8Q6NZY4 707 aaKnown RBP15.69■□□□□ 0.1
PFDN4-201ENST00000371419 SLC30A9Q6PML9 568 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 PACS1Q6VY07 963 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 SDCCAG8Q86SQ7 713 aaPredicted RBP15.69■□□□□ 0.1
PFDN4-201ENST00000371419 OTUD6BQ8N6M0 293 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.69■□□□□ 0.1
PFDN4-201ENST00000371419 FAM46DQ8NEK8 389 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 CCDC97Q96F63 343 aaPredicted RBP15.69■□□□□ 0.1
PFDN4-201ENST00000371419 ATP6V1G3Q96LB4 118 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 TIMM29Q9BSF4 260 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 BOCQ9BWV1 1114 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 TAAR2Q9P1P5 351 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 MARCH4Q9P2E8 410 aaPredicted RBP15.69■□□□□ 0.1
PFDN4-201ENST00000371419 FTSJ1Q9UET6 329 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 ZC3H7BQ9UGR2 993 aaKnown RBP15.69■□□□□ 0.1
PFDN4-201ENST00000371419 CHMP2BQ9UQN3 213 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 ST14Q9Y5Y6 855 aa15.69■□□□□ 0.1
PFDN4-201ENST00000371419 DNMT3AQ9Y6K1 912 aaPredicted RBP15.69■□□□□ 0.1
PFDN4-201ENST00000371419 GOLGA8TH3BQL2 631 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 EIF3HO15372 352 aaKnown RBP eCLIP15.68■□□□□ 0.1
PFDN4-201ENST00000371419 POP7O75817 140 aaKnown RBP15.68■□□□□ 0.1
PFDN4-201ENST00000371419 LDOC1O95751 146 aaPredicted RBP15.68■□□□□ 0.1
PFDN4-201ENST00000371419 VCLP18206 1134 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 PMLP29590 882 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 ZNF844Q08AG5 666 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 THOC5Q13769 683 aaKnown RBP15.68■□□□□ 0.1
PFDN4-201ENST00000371419 PUM1Q14671 1186 aaKnown RBP eCLIP15.68■□□□□ 0.12e-6■■□□□ 13.4
PFDN4-201ENST00000371419 PROX2Q3B8N5 592 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 PLA2G4EQ3MJ16 856 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 TUBB8Q3ZCM7 444 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 BCL7AQ4VC05 210 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 AGBL2Q5U5Z8 902 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 NEPROQ6NW34 567 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 C11orf96Q7Z7L8 435 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 LDB1Q86U70 411 aaPredicted RBP15.68■□□□□ 0.1
PFDN4-201ENST00000371419 PNPLA1Q8N8W4 532 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 FAM181AQ8N9Y4 354 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 GPR150Q8NGU9 434 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 GLMNQ92990 594 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 CNDP2Q96KP4 475 aaKnown RBP15.68■□□□□ 0.1
PFDN4-201ENST00000371419 WDR83Q9BRX9 315 aaKnown RBP15.68■□□□□ 0.1
PFDN4-201ENST00000371419 DPEP2Q9H4A9 486 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 KLC4Q9NSK0 619 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 C20orf96Q9NUD7 363 aaPredicted RBP15.68■□□□□ 0.1
PFDN4-201ENST00000371419 SLC23A2Q9UGH3 650 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 KCNK6Q9Y257 313 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 PCNX2A6NKB5 2137 aa15.68■□□□□ 0.1
PFDN4-201ENST00000371419 GOLGA4Q13439 2230 aaKnown RBP15.68■□□□□ 0.1
PFDN4-201ENST00000371419 DCDC2BA2VCK2 349 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 SGTAO43765 313 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 KCNJ13O60928 360 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 AP2A2O94973 939 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 CEACAM1P13688 526 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 PRLHRP49683 370 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 CLCNKAP51800 687 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 TRIP6Q15654 476 aaKnown RBP15.67■□□□□ 0.1
PFDN4-201ENST00000371419 SMAD1Q15797 465 aaKnown RBP15.67■□□□□ 0.1
PFDN4-201ENST00000371419 AMZ2Q86W34 360 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 RELL1Q8IUW5 271 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 ANKMY2Q8IV38 441 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 ZBED8Q8IZ13 594 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 CLDN19Q8N6F1 224 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 FBXO36Q8NEA4 188 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 NAT14Q8WUY8 206 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 ARL8AQ96BM9 186 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 CFAP36Q96G28 342 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 APOLD1Q96LR9 279 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 TCF12Q99081 682 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 TMEM109Q9BVC6 243 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 PHACTR1Q9C0D0 580 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 SAYSD1Q9NPB0 183 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 SPATS2LQ9NUQ6 558 aaKnown RBP15.67■□□□□ 0.1
PFDN4-201ENST00000371419 IL1RAPL1Q9NZN1 696 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 NCKIPSDQ9NZQ3 722 aa15.67■□□□□ 0.1
PFDN4-201ENST00000371419 COL5A1P20908 1838 aaPredicted RBP15.67■□□□□ 0.1
PFDN4-201ENST00000371419 KLHL33A6NCF5 533 aa15.66■□□□□ 0.1
PFDN4-201ENST00000371419 QSOX1O00391 747 aa15.66■□□□□ 0.1
PFDN4-201ENST00000371419 PFDN6O15212 129 aa15.66■□□□□ 0.1
PFDN4-201ENST00000371419 RIPK2O43353 540 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms