RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CDKL4Q5MAI5 379 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 PPP1R15BQ5SWA1 713 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 CERCAMQ5T4B2 595 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 INTS5Q6P9B9 1019 aaKnown RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 KIAA0319LQ8IZA0 1049 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 PGAM4Q8N0Y7 254 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 FBXL16Q8N461 479 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 OR10H4Q8NGA5 316 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 OR6K2Q8NGY2 324 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 LNX1Q8TBB1 728 aaPredicted RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 OR8D1Q8WZ84 308 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 TSSK3Q96PN8 268 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 AGO3Q9H9G7 860 aaKnown RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 ZNF639Q9UID6 485 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 FBXO5Q9UKT4 447 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 DPPA5A6NC42 116 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 CCRL2O00421 344 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 ACAP2Q15057 778 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 SLC25A52Q3SY17 297 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 CELF3Q5SZQ8 465 aaKnown RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 IDNKQ5T6J7 187 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 USP30Q70CQ3 517 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 SPERTQ8NA61 448 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 C5orf34Q96MH7 638 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 PHB2Q99623 299 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 OSER1Q9NX31 292 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 TAS2R7Q9NYW3 318 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 DIP2BQ9P265 1576 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 ARPC4-TTLL3A0A0A6YYG9 625 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 PITPNM1O00562 1244 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 LAMP2P13473 410 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 PTX3P26022 381 aaPredicted RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 RORCP51449 518 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 AFF1P51825 1210 aaKnown RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 PCBP1Q15365 356 aaKnown RBP eCLIP12.34□□□□□ -0.431e-6■■■■□ 26.7
HCFC1-202ENST00000369984 CLEC6AQ6EIG7 209 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 ILDR1Q86SU0 546 aaPredicted RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 GLIS3Q8NEA6 775 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 UFD1Q92890 307 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 ADAMDEC1O15204 470 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 CD247P20963 164 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 ZNF155Q12901 538 aaPredicted RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 CA9Q16790 459 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 NAT16Q8N8M0 369 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 SLC43A3Q8NBI5 491 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 PIGXQ8TBF5 258 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 COPS8Q99627 209 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 FKBP7Q9Y680 259 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 COLEC10Q9Y6Z7 277 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 EDF1O60869 148 aaKnown RBP12.33□□□□□ -0.43
HCFC1-202ENST00000369984 PAGE1O75459 146 aa12.33□□□□□ -0.43
HCFC1-202ENST00000369984 GTF2H2Q13888 395 aa12.33□□□□□ -0.43
HCFC1-202ENST00000369984 HECTD2Q5U5R9 776 aa12.33□□□□□ -0.43
HCFC1-202ENST00000369984 GTF2H2CQ6P1K8 395 aa12.33□□□□□ -0.43
HCFC1-202ENST00000369984 CMTR2Q8IYT2 770 aaKnown RBP12.33□□□□□ -0.43
HCFC1-202ENST00000369984 CADM2Q8N3J6 435 aa12.33□□□□□ -0.43
HCFC1-202ENST00000369984 MOV10Q9HCE1 1003 aaKnown RBP12.33□□□□□ -0.43
HCFC1-202ENST00000369984 FER1L4A9Z1Z3 1794 aa12.33□□□□□ -0.43
HCFC1-202ENST00000369984 RIMS1Q86UR5 1692 aaKnown RBP12.33□□□□□ -0.44
HCFC1-202ENST00000369984 NEDD8-MDP1E9PL57 170 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 NARSO43776 548 aaKnown RBP12.33□□□□□ -0.44
HCFC1-202ENST00000369984 ADH1CP00326 375 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 ERBB2P04626 1255 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 PTPN9P43378 593 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 MRPS6P82932 125 aaKnown RBP12.33□□□□□ -0.44
HCFC1-202ENST00000369984 SULT2A1Q06520 285 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 SP140Q13342 867 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 CENPSQ8N2Z9 138 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 KAT2AQ92830 837 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 TOP1MTQ969P6 601 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 AASSQ9UDR5 926 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 ZNF510Q9Y2H8 683 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 EFCAB9A8MZ26 197 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 NT5EP21589 574 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 DCKP27707 260 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 TSPAN5P62079 268 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 PRR5P85299 388 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 ECT2LQ008S8 904 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 HSDL1Q3SXM5 330 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 GRHL2Q6ISB3 625 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 FAM129CQ86XR2 697 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 GPR152Q8TDT2 470 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 TAMM41Q96BW9 452 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 MYO19Q96H55 970 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 NMUR2Q9GZQ4 415 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 WDR55Q9H6Y2 383 aaPredicted RBP12.33□□□□□ -0.44
HCFC1-202ENST00000369984 MRPS23Q9Y3D9 190 aaKnown RBP12.33□□□□□ -0.44
HCFC1-202ENST00000369984 MAGEA6P43360 314 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 RPS9P46781 194 aaKnown RBP12.33□□□□□ -0.44
HCFC1-202ENST00000369984 LAPTM4BQ86VI4 370 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 RANBP3LQ86VV4 465 aaPredicted RBP12.33□□□□□ -0.44
HCFC1-202ENST00000369984 TMCO6Q96DC7 493 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 DUSP16Q9BY84 665 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 HES2Q9Y543 173 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 TULP3O75386 442 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 MT-ND1P03886 318 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 TNFSF9P41273 254 aa12.33□□□□□ -0.44
HCFC1-202ENST00000369984 MRPS5P82675 430 aaKnown RBP12.33□□□□□ -0.44
HCFC1-202ENST00000369984 TUBGCP5Q96RT8 1024 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms