RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 A0A1W2PP55 124 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 CHURC1-FNTBB4DL54 471 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 TM7SF2O76062 418 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 ADH1BP00325 375 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 NDUFV2P19404 249 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 C5AR1P21730 350 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 FMO4P31512 558 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 MC4RP32245 332 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 MXRA7P84157 204 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 PTSQ03393 145 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 PEX6Q13608 980 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 PDCD2Q16342 344 aaPredicted RBP17.09■□□□□ 0.33
UBE3D-203ENST00000369747 PIP5KL1Q5T9C9 394 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 PSAPL1Q6NUJ1 521 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 FRMD7Q6ZUT3 714 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 SYT13Q7L8C5 426 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 ENDOVQ8N8Q3 282 aaKnown RBP17.09■□□□□ 0.33
UBE3D-203ENST00000369747 CMTM5Q96DZ9 223 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 EBF2Q9HAK2 575 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 CD93Q9NPY3 652 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 CDYLQ9Y232 598 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 F8W8V4 182 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 H3BMM5 538 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 STX7O15400 261 aaKnown RBP17.09■□□□□ 0.33
UBE3D-203ENST00000369747 NDUFS3O75489 264 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 DCNP07585 359 aaKnown RBP17.09■□□□□ 0.33
UBE3D-203ENST00000369747 IMPDH1P20839 514 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 PRDX6P30041 224 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 MMP12P39900 470 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 NFKB2Q00653 900 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 RALGDSQ12967 914 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 PDAP1Q13442 181 aaKnown RBP17.09■□□□□ 0.33
UBE3D-203ENST00000369747 NUMA1Q14980 2115 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 KHDC1Q4VXA5 237 aaKnown RBP17.09■□□□□ 0.33
UBE3D-203ENST00000369747 SWT1Q5T5J6 900 aaKnown RBP17.09■□□□□ 0.33
UBE3D-203ENST00000369747 AGBL4Q5VU57 503 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.09■□□□□ 0.33
UBE3D-203ENST00000369747 ACAD11Q709F0 780 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 SCUBE1Q8IWY4 988 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 HDDC3Q8N4P3 179 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 L3HYPDHQ96EM0 354 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 SIPA1Q96FS4 1042 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 CLPTM1LQ96KA5 538 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 UHRF1Q96T88 793 aaPredicted RBP17.09■□□□□ 0.33
UBE3D-203ENST00000369747 THTPAQ9BU02 230 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 CCDC28BQ9BUN5 200 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 HDAC8Q9BY41 377 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 GSTO2Q9H4Y5 243 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 ZNF385DQ9H6B1 395 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 TNFRSF12AQ9NP84 129 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 IL17CQ9P0M4 197 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 FNDC3AQ9Y2H6 1198 aaKnown RBP17.09■□□□□ 0.33
UBE3D-203ENST00000369747 ZNF106Q9H2Y7 1883 aaKnown RBP17.09■□□□□ 0.33
UBE3D-203ENST00000369747 ANKRD12Q6UB98 2062 aa17.09■□□□□ 0.33
UBE3D-203ENST00000369747 TECTAO75443 2155 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 H7C0S8 307 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 AREL1O15033 823 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 RNASEH2AO75792 299 aaKnown RBP17.08■□□□□ 0.33
UBE3D-203ENST00000369747 SRP72O76094 671 aaKnown RBP17.08■□□□□ 0.33
UBE3D-203ENST00000369747 RHOBTB1O94844 696 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 TPBGLP0DKB5 382 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 COX4I1P13073 169 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 GABRG2P18507 467 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 SLC25A3Q00325 362 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 GALNT1Q10472 559 aaPredicted RBP17.08■□□□□ 0.33
UBE3D-203ENST00000369747 OR4D1Q15615 310 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 ACSBG2Q5FVE4 666 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 RFLNAQ6ZTI6 216 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 ULK2Q8IYT8 1036 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 HMGB4Q8WW32 186 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 CLDN23Q96B33 292 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 MAELQ96JY0 434 aaKnown RBP17.08■□□□□ 0.33
UBE3D-203ENST00000369747 BIRC8Q96P09 236 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 WRAP53Q9BUR4 548 aaKnown RBP17.08■□□□□ 0.33
UBE3D-203ENST00000369747 FBRSQ9HAH7 460 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 FBXL12Q9NXK8 326 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 NOP53Q9NZM5 478 aaKnown RBP17.08■□□□□ 0.33
UBE3D-203ENST00000369747 SIT1Q9Y3P8 196 aa17.08■□□□□ 0.33
UBE3D-203ENST00000369747 ANP32DO95626 131 aa17.08■□□□□ 0.32
UBE3D-203ENST00000369747 DNTTP04053 509 aa17.08■□□□□ 0.32
UBE3D-203ENST00000369747 EZRP15311 586 aaKnown RBP17.08■□□□□ 0.32
UBE3D-203ENST00000369747 VIPR1P32241 457 aa17.08■□□□□ 0.32
UBE3D-203ENST00000369747 TAS2R38P59533 333 aa17.08■□□□□ 0.32
UBE3D-203ENST00000369747 SIGLEC14Q08ET2 396 aa17.08■□□□□ 0.32
UBE3D-203ENST00000369747 ZNF678Q5SXM1 525 aa17.08■□□□□ 0.32
UBE3D-203ENST00000369747 ERAP2Q6P179 960 aa17.08■□□□□ 0.32
UBE3D-203ENST00000369747 PAQR3Q6TCH7 311 aa17.08■□□□□ 0.32
UBE3D-203ENST00000369747 CPSF7Q8N684 471 aaKnown RBP17.08■□□□□ 0.32
UBE3D-203ENST00000369747 RHEBL1Q8TAI7 183 aa17.08■□□□□ 0.32
UBE3D-203ENST00000369747 EDAQ92838 391 aa17.08■□□□□ 0.32
UBE3D-203ENST00000369747 PBXIP1Q96AQ6 731 aa17.08■□□□□ 0.32
UBE3D-203ENST00000369747 EML4Q9HC35 981 aaKnown RBP17.08■□□□□ 0.32
UBE3D-203ENST00000369747 TAS2R13Q9NYV9 303 aa17.08■□□□□ 0.32
UBE3D-203ENST00000369747 LOC100653049A0A140TA62 436 aa17.07■□□□□ 0.32
UBE3D-203ENST00000369747 SDHDO14521 159 aa17.07■□□□□ 0.32
UBE3D-203ENST00000369747 KRT34O76011 436 aa17.07■□□□□ 0.32
UBE3D-203ENST00000369747 CYP2A6P11509 494 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-203ENST00000369747 CD1EP15812 388 aa17.07■□□□□ 0.32
UBE3D-203ENST00000369747 TTPAP49638 278 aa17.07■□□□□ 0.32
UBE3D-203ENST00000369747 DGKEP52429 567 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms