RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 MC4RP32245 332 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 CXCR5P32302 372 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 CDKN1CP49918 316 aaPredicted RBP18.6■□□□□ 0.57
CKS1B-203ENST00000368439 NFE2L1Q14494 772 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 LONRF2Q1L5Z9 754 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 BCL7AQ4VC05 210 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 FNBP1LQ5T0N5 605 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 WDR74Q6RFH5 385 aaPredicted RBP18.6■□□□□ 0.57
CKS1B-203ENST00000368439 TMEM26Q6ZUK4 368 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 DET1Q7L5Y6 550 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 LINC00523Q86TU6 105 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 REXO1L1PQ8IX06 675 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 KCNE4Q8WWG9 221 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 ULK4Q96C45 1275 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 CDKN2AIPNLQ96HQ2 116 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 ZNF514Q96K75 400 aaPredicted RBP18.6■□□□□ 0.57
CKS1B-203ENST00000368439 DPH1Q9BZG8 443 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 PRORYQ9H606 182 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 SLC30A1Q9Y6M5 507 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 IGSF10Q6WRI0 2623 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 IGLV3-16A0A075B6K0 115 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 GOLGA6L3A6NEY3 463 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 C9orf172C9J069 976 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 VIPP01282 170 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 PRSS56P0CW18 603 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 FGF3P11487 239 aaPredicted RBP18.59■□□□□ 0.57
CKS1B-203ENST00000368439 ITGALP20701 1170 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 RPL22P35268 128 aaKnown RBP18.59■□□□□ 0.57
CKS1B-203ENST00000368439 CDH17Q12864 832 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 GPR33Q49SQ1 333 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 METRNLQ641Q3 311 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 ARHGAP22Q7Z5H3 698 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 STYXQ8WUJ0 223 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 AHCYL2Q96HN2 611 aaKnown RBP18.59■□□□□ 0.57
CKS1B-203ENST00000368439 LINC00615Q96LM1 132 aaPredicted RBP18.59■□□□□ 0.57
CKS1B-203ENST00000368439 KCNF1Q9H3M0 494 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 SLC40A1Q9NP59 571 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 CASS4Q9NQ75 786 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 RAB6BQ9NRW1 208 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 POT1Q9NUX5 634 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 PAK5Q9P286 719 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 CRLS1Q9UJA2 301 aa18.59■□□□□ 0.57
CKS1B-203ENST00000368439 SDK2Q58EX2 2172 aa18.58■□□□□ 0.57
CKS1B-203ENST00000368439 MGAT4DA6NG13 374 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 CEP104O60308 925 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 PRAMEF10O60809 474 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 ARSDP51689 593 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 CLN3Q13286 438 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 SEPT6Q14141 434 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 PIANPQ8IYJ0 282 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 OR2L2Q8NH16 312 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 MAIP1Q8WWC4 291 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 NCSTNQ92542 709 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 USP7Q93009 1102 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 B3GNT4Q9C0J1 378 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 EPB41L1Q9H4G0 881 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 FOXJ2Q9P0K8 574 aa18.58■□□□□ 0.56
CKS1B-203ENST00000368439 MN1Q10571 1320 aaPredicted RBP18.57■□□□□ 0.56
CKS1B-203ENST00000368439 KLK10O43240 276 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 ACRV1P26436 265 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 KCNJ1P48048 391 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 PRLHRP49683 370 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 MAPK10P53779 464 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 GPR18Q14330 331 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 RPE65Q16518 533 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 ZNF658BQ4V348 819 aaPredicted RBP18.57■□□□□ 0.56
CKS1B-203ENST00000368439 CCDC38Q502W7 563 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 SERPINA9Q86WD7 417 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 JAMLQ86YT9 394 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 TRIM48Q8IWZ4 208 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 RBM12BQ8IXT5 1001 aaKnown RBP18.57■□□□□ 0.56
CKS1B-203ENST00000368439 RASGEF1CQ8N431 466 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 BMPERQ8N8U9 685 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 PRELID2Q8N945 189 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 CCDC89Q8N998 374 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 OR13J1Q8NGT2 312 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 GPR150Q8NGU9 434 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 PMEPA1Q969W9 287 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 RANBP9Q96S59 729 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 COPS8Q99627 209 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 OCIAD1Q9NX40 245 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 ZDHHC3Q9NYG2 299 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 PSMD13Q9UNM6 376 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 MGAQ8IWI9 3026 aa18.57■□□□□ 0.56
CKS1B-203ENST00000368439 CCDC78A2IDD5 438 aa18.56■□□□□ 0.56
CKS1B-203ENST00000368439 KLHL33A6NCF5 533 aa18.56■□□□□ 0.56
CKS1B-203ENST00000368439 C9P02748 559 aa18.56■□□□□ 0.56
CKS1B-203ENST00000368439 ATP1B2P14415 290 aaPredicted RBP18.56■□□□□ 0.56
CKS1B-203ENST00000368439 PBLDP30039 288 aaPredicted RBP18.56■□□□□ 0.56
CKS1B-203ENST00000368439 MAPK9P45984 424 aa18.56■□□□□ 0.56
CKS1B-203ENST00000368439 ZRANB3Q5FWF4 1079 aa18.56■□□□□ 0.56
CKS1B-203ENST00000368439 LILRA3Q8N6C8 439 aaPredicted RBP18.56■□□□□ 0.56
CKS1B-203ENST00000368439 DNAAF3Q8N9W5 541 aa18.56■□□□□ 0.56
CKS1B-203ENST00000368439 AGBL5Q8NDL9 886 aa18.56■□□□□ 0.56
CKS1B-203ENST00000368439 HEXDCQ8WVB3 486 aa18.56■□□□□ 0.56
CKS1B-203ENST00000368439 CXorf40BQ96DE9 158 aa18.56■□□□□ 0.56
CKS1B-203ENST00000368439 DCUN1D1Q96GG9 259 aa18.56■□□□□ 0.56
CKS1B-203ENST00000368439 AKAP7Q9P0M2 348 aaPredicted RBP18.56■□□□□ 0.56
CKS1B-203ENST00000368439 RIMKLBQ9ULI2 386 aa18.56■□□□□ 0.56
CKS1B-203ENST00000368439 JRKLQ9Y4A0 524 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms