RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 NOCTQ9UK39 431 aaKnown RBP14.3□□□□□ -0.12
VAMP4-202ENST00000367740 PADI2Q9Y2J8 665 aa14.3□□□□□ -0.12
VAMP4-202ENST00000367740 UBA6A0AVT1 1052 aaPredicted RBP14.29□□□□□ -0.12
VAMP4-202ENST00000367740 PCDH17O14917 1159 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 DDX3YO15523 660 aaKnown RBP14.29□□□□□ -0.12
VAMP4-202ENST00000367740 LDB2O43679 373 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 ZBTB11O95625 1053 aaPredicted RBP14.29□□□□□ -0.12
VAMP4-202ENST00000367740 IGHEP01854 428 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 ZNF7P17097 686 aaPredicted RBP14.29□□□□□ -0.12
VAMP4-202ENST00000367740 IL4RP24394 825 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 HADHAP40939 763 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 ZNF143P52747 638 aaPredicted RBP14.29□□□□□ -0.12
VAMP4-202ENST00000367740 ART1P52961 327 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 TLE4Q04727 773 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 RALGPS1Q5JS13 557 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 AGAP9Q5VTM2 703 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 ZNF385CQ66K41 422 aaPredicted RBP14.29□□□□□ -0.12
VAMP4-202ENST00000367740 ZNF324BQ6AW86 544 aaPredicted RBP14.29□□□□□ -0.12
VAMP4-202ENST00000367740 FCRL6Q6DN72 434 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 WASH2PQ6VEQ5 465 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 RFX8Q6ZV50 586 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 RAVER1Q8IY67 606 aaKnown RBP14.29□□□□□ -0.12
VAMP4-202ENST00000367740 DNAJB14Q8TBM8 379 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 CNDP1Q96KN2 507 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 TIMM29Q9BSF4 260 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 SELENOOQ9BVL4 669 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 TLR10Q9BXR5 811 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 OCEL1Q9H607 264 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 ACTR5Q9H9F9 607 aaPredicted RBP14.29□□□□□ -0.12
VAMP4-202ENST00000367740 MCCC2Q9HCC0 563 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 GDPD2Q9HCC8 539 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 DTLQ9NZJ0 730 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 AP4E1Q9UPM8 1137 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 BTRCQ9Y297 605 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 WDR37Q9Y2I8 494 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 NEU2Q9Y3R4 380 aa14.29□□□□□ -0.12
VAMP4-202ENST00000367740 TRGV8A0A0C4DH27 118 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 OR5K3A6NET4 321 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 GPR89AB7ZAQ6 455 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 C9J4A7 227 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 CCL21O00585 134 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 PEX12O00623 359 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 GPR89BP0CG08 455 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 KIR3DL1P43629 444 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 SPINT3P49223 89 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 FMO1Q01740 532 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 SSPNQ14714 243 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 PLCL1Q15111 1095 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 TMTC4Q5T4D3 741 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 KLHL35Q6PF15 583 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 FBXO38Q6PIJ6 1188 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 ANKRD12Q6UB98 2062 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 ADGRG6Q86SQ4 1221 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 LRRTM4Q86VH4 590 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 CREBRFQ8IUR6 639 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 ZNF547Q8IVP9 402 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 NDUFAF2Q8N183 169 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 BCORP1Q8N888 145 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 C3orf20Q8ND61 904 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 OR1L3Q8NH93 324 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 PPM1MQ96MI6 270 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 GBP5Q96PP8 586 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 KCTD15Q96SI1 283 aaPredicted RBP14.28□□□□□ -0.12
VAMP4-202ENST00000367740 DHRS4Q9BTZ2 278 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 FAM83DQ9H4H8 585 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 SOHLH2Q9NX45 425 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 TRIM10Q9UDY6 481 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 ZDHHC9Q9Y397 364 aa14.28□□□□□ -0.12
VAMP4-202ENST00000367740 CCDC78A2IDD5 438 aa14.27□□□□□ -0.13
VAMP4-202ENST00000367740 KMOO15229 486 aa14.27□□□□□ -0.13
VAMP4-202ENST00000367740 CHRNB2P17787 502 aa14.27□□□□□ -0.13
VAMP4-202ENST00000367740 EPHB1P54762 984 aa14.27□□□□□ -0.13
VAMP4-202ENST00000367740 IHHQ14623 411 aa14.27□□□□□ -0.13
VAMP4-202ENST00000367740 CDSNQ15517 529 aa14.27□□□□□ -0.13
VAMP4-202ENST00000367740 MTFR2Q6P444 385 aa14.27□□□□□ -0.13
VAMP4-202ENST00000367740 PPP1R32Q7Z5V6 425 aa14.27□□□□□ -0.13
VAMP4-202ENST00000367740 CHTF18Q8WVB6 975 aa14.27□□□□□ -0.13
VAMP4-202ENST00000367740 HS3ST6Q96QI5 342 aa14.27□□□□□ -0.13
VAMP4-202ENST00000367740 DPH2Q9BQC3 489 aaPredicted RBP14.27□□□□□ -0.13
VAMP4-202ENST00000367740 NAA15Q9BXJ9 866 aaKnown RBP14.27□□□□□ -0.13
VAMP4-202ENST00000367740 DHX35Q9H5Z1 703 aaKnown RBP14.27□□□□□ -0.13
VAMP4-202ENST00000367740 FANCEQ9HB96 536 aa14.27□□□□□ -0.13
VAMP4-202ENST00000367740 TRIM39Q9HCM9 518 aa14.27□□□□□ -0.13
VAMP4-202ENST00000367740 DNPEPQ9ULA0 475 aa14.27□□□□□ -0.13
VAMP4-202ENST00000367740 NSD1Q96L73 2696 aaPredicted RBP14.26□□□□□ -0.13
VAMP4-202ENST00000367740 TCRBV5S1A1TA0A578 114 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 SIGLEC16A6NMB1 481 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 F8VZ95 297 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 DAPK3O43293 454 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 FGFR1OPO95684 399 aaKnown RBP14.26□□□□□ -0.13
VAMP4-202ENST00000367740 CYP2A7P20853 494 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 IDSP22304 550 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 PBX1P40424 430 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 FOLR3P41439 243 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 CA7P43166 264 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 ARCN1P48444 511 aaKnown RBP14.26□□□□□ -0.13
VAMP4-202ENST00000367740 FOXL2P58012 376 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 RPL7AP62424 266 aaKnown RBP14.26□□□□□ -0.13
VAMP4-202ENST00000367740 ADORA2A-AS1P86434 159 aa14.26□□□□□ -0.13
VAMP4-202ENST00000367740 CDR2Q01850 454 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms