RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 FGD3Q5JSP0 725 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 RNF219Q5W0B1 726 aaPredicted RBP12.18□□□□□ -0.46
PTPN7-202ENST00000367279 SFRP1Q8N474 314 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 TMBIM1Q969X1 311 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 PLEKHG4BQ96PX9 1271 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 LTB4R2Q9NPC1 389 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 PCDHB9Q9Y5E1 797 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 KANSL1LA0AUZ9 987 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 FAM234BA2RU67 622 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 ACSL4O60488 711 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 RPL17P18621 184 aaKnown RBP12.18□□□□□ -0.46
PTPN7-202ENST00000367279 SLC11A2P49281 568 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 TTPAP49638 278 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 FLT3LGP49771 235 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 CREB5Q02930 508 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 FOXM1Q08050 763 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 TAF12Q16514 161 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 AARS2Q5JTZ9 985 aaKnown RBP12.18□□□□□ -0.46
PTPN7-202ENST00000367279 PRSS55Q6UWB4 352 aaPredicted RBP12.18□□□□□ -0.46
PTPN7-202ENST00000367279 PATL1Q86TB9 770 aaKnown RBP12.18□□□□□ -0.46
PTPN7-202ENST00000367279 COLGALT2Q8IYK4 626 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 BPIFB6Q8NFQ5 453 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 OR10Q1Q8NGQ4 319 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 BIRC8Q96P09 236 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 LRRC3Q9BY71 257 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 SEZ6LQ9BYH1 1024 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 CCDC90BQ9GZT6 254 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 RRAGCQ9HB90 399 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 FANCEQ9HB96 536 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 RSL1D1O76021 490 aaKnown RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 ELNP15502 786 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 CCND3P30281 292 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 ATP5C1P36542 298 aaKnown RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 MTHFRP42898 656 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 SGSHP51688 502 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 EMP3P54852 163 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 EEFSECP57772 596 aaKnown RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 PTGR1Q14914 329 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 CTSL3PQ5NE16 218 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 TXNDC11Q6PKC3 985 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 CYP20A1Q6UW02 462 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 C17orf99Q6UX52 265 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 FAM151BQ6UXP7 276 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 MILR1Q7Z6M3 343 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 ZNF598Q86UK7 904 aaKnown RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 HID1Q8IV36 788 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 HS3ST5Q8IZT8 346 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 OR4F6Q8NGB9 312 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 CD200R1Q8TD46 325 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 TM6SF2Q9BZW4 377 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 SMURF2Q9HAU4 748 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 AFF4Q9UHB7 1163 aaKnown RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 TCRBV5S2A0A599 114 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 MTMR11A4FU01 709 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 E2F6O75461 281 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 ALPIP09923 528 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 IL7RP16871 459 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 FKBP1BP68106 108 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 HMGCS1Q01581 520 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 SEMG2Q02383 582 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 PIGFQ07326 219 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 CRHR2Q13324 411 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 FAM98BQ52LJ0 330 aaKnown RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 C16orf87Q6PH81 154 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 RSPO2Q6UXX9 243 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 Q6ZSR9 355 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 SLC24A5Q71RS6 500 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 SPRED1Q7Z699 444 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 ITIH5Q86UX2 942 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 DTWD1Q8N5C7 304 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 OR10A6Q8NH74 314 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 FAM162AQ96A26 154 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 TADA1Q96BN2 335 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 CCDC138Q96M89 665 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 TRIB3Q96RU7 358 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 NUSAP1Q9BXS6 441 aaKnown RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 IPPKQ9H8X2 491 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 PLGRKTQ9HBL7 147 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 DNAAF2Q9NVR5 837 aaKnown RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 U3KQV3 271 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 GREB1Q4ZG55 1949 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 TRPM7Q96QT4 1865 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 TYW5A2RUC4 315 aaKnown RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 H3BMQ9 156 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 E2F3O00716 465 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 BNIP3LO60238 219 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 DFNA5O60443 496 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 DEAF1O75398 565 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 CYBAP13498 195 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 RFTN2Q52LD8 501 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 ATXN7L2Q5T6C5 722 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 OGFOD2Q6N063 350 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 CARNMT1Q8N4J0 409 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 CLDN19Q8N6F1 224 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 CCDC97Q96F63 343 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-202ENST00000367279 COG8Q96MW5 612 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 PSKH2Q96QS6 385 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 ZBTB18Q99592 522 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 MGME1Q9BQP7 344 aa12.17□□□□□ -0.46
PTPN7-202ENST00000367279 TDRD1Q9BXT4 1180 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms