RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 LINGO1Q96FE5 620 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 GCNAQ96QF7 691 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 NEURL2Q9BR09 285 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 RTN4RQ9BZR6 473 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 KLHL4Q9C0H6 718 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 SPATC1LQ9H0A9 340 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 KCNK15Q9H427 330 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 TRPC7Q9HCX4 862 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 DONSONQ9NYP3 566 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 MARCH4Q9P2E8 410 aaPredicted RBP4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZNF148Q9UQR1 794 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 KIAA1210Q9ULL0 1709 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 LOC102723996A0A087X1L8 192 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 GPR75-ASB3A0A0A6YYF3 556 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 NDUFS4O43181 175 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 CREG1O75629 220 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 GCNT3O95395 438 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 KRT19P08727 400 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 GM2AP17900 193 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 EEF1A1P68104 462 aaKnown RBP4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 MFSD4BQ5TF39 518 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 EEF1A1P5Q5VTE0 462 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 GARNL3Q5VVW2 1013 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 KRT79Q5XKE5 535 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 PLXDC2Q6UX71 529 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 KCTD8Q6ZWB6 473 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 HAUS6Q7Z4H7 955 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 DNAAF5Q86Y56 855 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 DCP1BQ8IZD4 617 aaKnown RBP4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 MUC20Q8N307 709 aaPredicted RBP4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 CIARTQ8N365 385 aaPredicted RBP4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 TAS1R2Q8TE23 839 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 PTPMT1Q8WUK0 201 aaPredicted RBP4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZFAND2BQ8WV99 257 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 SEMA4DQ92854 862 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 TMCO6Q96DC7 493 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 OXNAD1Q96HP4 312 aaPredicted RBP4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 SLC22A12Q96S37 553 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 SLA2Q9H6Q3 261 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZNF556Q9HAH1 456 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 CHMP1AQ9HD42 196 aaPredicted RBP4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 PSD3Q9NYI0 1048 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 CLIC5Q9NZA1 410 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 AMACRQ9UHK6 382 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 PROCRQ9UNN8 238 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 PASKQ96RG2 1323 aa4.1□□□□□ -1.75
RNU6-560P-201ENST00000364007 KRTAP29-1A8MX34 341 aaPredicted RBP4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 BUB3O43684 328 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 XPNPEP2O43895 674 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 BMP10O95393 424 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 DGKAP23743 735 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 RPL24P83731 157 aaKnown RBP4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 TROAPQ12815 778 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 PRKAA1Q13131 559 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 KCTD2Q14681 263 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 FAM76BQ5HYJ3 339 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 TEX38Q6PEX7 206 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 C9orf139Q6ZV77 190 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 ADIPOR2Q86V24 386 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 EXOC3L1Q86VI1 746 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 FBXO39Q8N4B4 442 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 MAB21L3Q8N8X9 362 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 SYT2Q8N9I0 419 aaPredicted RBP4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 OR13A1Q8NGR1 328 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 WDR20Q8TBZ3 569 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 PPP4R1Q8TF05 950 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 ERLEC1Q96DZ1 483 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZNF582Q96NG8 517 aaPredicted RBP4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 SLF1Q9BQI6 1058 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 YIPF1Q9Y548 306 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 FAM169AQ9Y6X4 670 aa4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZNF644Q9H582 1327 aaPredicted RBP4.09□□□□□ -1.75
RNU6-560P-201ENST00000364007 TEX13DA0A0J9YY54 714 aaPredicted RBP4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 GLOD5A6NK44 160 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 A6NL46 340 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 C16orf97H3BN30 126 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 TO15178 435 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 P4HA2O15460 535 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 ASTN2O75129 1339 aaPredicted RBP4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 TFAP2AP05549 437 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 LIPFP07098 398 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 NR1D1P20393 614 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 NR2F2P24468 414 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 GABRA5P31644 462 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 AHRP35869 848 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 KRT20P35900 424 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 FMO5P49326 533 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 SNRPEP62304 92 aaKnown RBP4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 RPL36AP83881 106 aaKnown RBP4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 ARL16Q0P5N6 197 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 BAATQ14032 418 aaPredicted RBP4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 MELKQ14680 651 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 C15orf59Q2T9L4 293 aaPredicted RBP4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 ZNF718Q3SXZ3 478 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 GPR139Q6DWJ6 353 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 WBP2NLQ6ICG8 309 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 ZNF852Q6ZMS4 543 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 FOXL2NBQ6ZUU3 175 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 PLEKHM3Q6ZWE6 761 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms