RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 RAD23AP54725 363 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 BRAT1Q6PJG6 821 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 APCDD1Q8J025 514 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 KLHL25Q9H0H3 589 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 ELOVL2Q9NXB9 296 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 NUDT4Q9NZJ9 180 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 BACE2Q9Y5Z0 518 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 TEX264Q9Y6I9 313 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 URADA6NGE7 173 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 HNRNPRO43390 633 aaKnown RBP13.54□□□□□ -0.24
SMC6-201ENST00000351948 PAK4O96013 591 aaPredicted RBP13.54□□□□□ -0.24
SMC6-201ENST00000351948 CTSAP10619 480 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 GDF5P43026 501 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 TRPC1P48995 793 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 CLCNKAP51800 687 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 KLF10Q13118 480 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 ZIK1Q3SY52 487 aaPredicted RBP13.54□□□□□ -0.24
SMC6-201ENST00000351948 MINDY4Q4G0A6 757 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 HOMEZQ8IX15 550 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 EID3Q8N140 333 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 DCAKDQ8WVC6 231 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 EDDM13A0A1B0GTR0 161 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 CDC7O00311 574 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 KRT36O76013 467 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 IMPDH2P12268 514 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 SLC34A1Q06495 639 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 CHMP1BQ7LBR1 199 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 AMIGO2Q86SJ2 522 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 SCD5Q86SK9 330 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 RP9Q8TA86 221 aaKnown RBP13.54□□□□□ -0.24
SMC6-201ENST00000351948 NELL1Q92832 810 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 SLCO2A1Q92959 643 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 TLCD1Q96CP7 247 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 FBXW2Q9UKT8 454 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 CNTN6Q9UQ52 1028 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 COLEC10Q9Y6Z7 277 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 CEP290O15078 2479 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 A0A0U1RQS6 177 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 B4DGG1 531 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 ANXA4P09525 319 aaPredicted RBP13.54□□□□□ -0.24
SMC6-201ENST00000351948 ALDH4A1P30038 563 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 FOXN2P32314 431 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 WDR4P57081 412 aaKnown RBP13.54□□□□□ -0.24
SMC6-201ENST00000351948 KLF1Q13351 362 aaPredicted RBP13.54□□□□□ -0.24
SMC6-201ENST00000351948 ZNF648Q5T619 568 aaPredicted RBP13.54□□□□□ -0.24
SMC6-201ENST00000351948 ZNF572Q7Z3I7 529 aaPredicted RBP13.54□□□□□ -0.24
SMC6-201ENST00000351948 CLNKQ7Z7G1 428 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 DHDDSQ86SQ9 333 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 GSTCDQ8NEC7 633 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 OR4A15Q8NGL6 344 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 UGT2B28Q9BY64 529 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 ANAPC2Q9UJX6 822 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 RHPN2P1A8MT19 583 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 GMFGO60234 142 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 RAB33AQ14088 237 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 LDLRAP1Q5SW96 308 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 C9orf64Q5T6V5 341 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 CPTPQ5TA50 214 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 ZNF549Q6P9A3 640 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 SLC38A3Q99624 504 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 SRMSQ9H3Y6 488 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 USP29Q9HBJ7 922 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 INTS10Q9NVR2 710 aaKnown RBP13.53□□□□□ -0.24
SMC6-201ENST00000351948 TTC34A8MYJ7 566 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 FCGR1AP12314 374 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 BLVRAP53004 296 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 LRRC26Q2I0M4 334 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 KLHL35Q6PF15 583 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 ADCK1Q86TW2 530 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 RELTQ969Z4 430 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 PTGES3LE9PB15 166 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 GTF2E2P29084 291 aaKnown RBP13.53□□□□□ -0.24
SMC6-201ENST00000351948 ELF3P78545 371 aaPredicted RBP13.53□□□□□ -0.24
SMC6-201ENST00000351948 C2orf80Q0P641 193 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 TPRG1Q6ZUI0 275 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 CNTRLQ7Z7A1 2325 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 ZC3HC1Q86WB0 502 aaKnown RBP13.53□□□□□ -0.24
SMC6-201ENST00000351948 KRT73Q86Y46 540 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 MAGEE2Q8TD90 523 aaPredicted RBP13.53□□□□□ -0.24
SMC6-201ENST00000351948 EEF1AKMT1Q8WVE0 214 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 RAD51AP1Q96B01 352 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 SIGLEC10Q96LC7 697 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 ZDHHC3Q9NYG2 299 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 N6AMT1Q9Y5N5 214 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 DCLK1O15075 740 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 ACADSP16219 412 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 PREPP48147 710 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 LSM12Q3MHD2 195 aaKnown RBP13.53□□□□□ -0.24
SMC6-201ENST00000351948 WASHC2DQ5SRD0 308 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 TMEM198Q66K66 360 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 CAND1Q86VP6 1230 aaKnown RBP13.53□□□□□ -0.24
SMC6-201ENST00000351948 TDRPQ86YL5 185 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 ZDHHC13Q8IUH4 622 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 CDK20Q8IZL9 346 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 EBF4Q9BQW3 602 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 TMEM109Q9BVC6 243 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 BTBD1Q9H0C5 482 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 ADAM7Q9H2U9 754 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 SFXN1Q9H9B4 322 aa13.53□□□□□ -0.24
SMC6-201ENST00000351948 MYO5AQ9Y4I1 1855 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms