RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 IL1R1P14778 569 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 DDCP20711 480 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 NMBRP28336 390 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 NR2C2P49116 596 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 DNAJB13P59910 316 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 IFRD2Q12894 506 aaPredicted RBP13.1□□□□□ -0.31
IFT88-202ENST00000351808 FAM98BQ52LJ0 330 aaKnown RBP13.1□□□□□ -0.31
IFT88-202ENST00000351808 CLVS2Q5SYC1 327 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 STYK1Q6J9G0 422 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 TMEM65Q6PI78 240 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 PID1Q7Z2X4 250 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 MFSD6LQ8IWD5 586 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 CCNYQ8ND76 341 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 GMCL1P1Q8NEA9 526 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 Q96MT0 163 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 RBM4BQ9BQ04 359 aaKnown RBP13.1□□□□□ -0.31
IFT88-202ENST00000351808 KIFC1Q9BW19 673 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 RBM4Q9BWF3 364 aaKnown RBP13.1□□□□□ -0.31
IFT88-202ENST00000351808 CARS2Q9HA77 564 aaKnown RBP13.1□□□□□ -0.31
IFT88-202ENST00000351808 TMLHEQ9NVH6 421 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 EVA1BQ9NVM1 165 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 SCN3BQ9NY72 215 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 C3orf18Q9UK00 162 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 PEX16Q9Y5Y5 336 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 STYXL1Q9Y6J8 313 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 CIB4A0PJX0 185 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 A8MT66 165 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 DFFAO00273 331 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 MITFO75030 526 aaPredicted RBP13.1□□□□□ -0.31
IFT88-202ENST00000351808 CCNYL3P0C7X3 344 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 HOXD8P13378 290 aaPredicted RBP13.1□□□□□ -0.31
IFT88-202ENST00000351808 TALDO1P37837 337 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 RAB10P61026 200 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 SIM2Q14190 667 aaPredicted RBP13.1□□□□□ -0.31
IFT88-202ENST00000351808 CSHL1Q14406 222 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 MFSD13AQ14CX5 517 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 PRSS36Q5K4E3 855 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 NCBP2-AS2Q69YL0 99 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 CDC42EP5Q6NZY7 148 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 BRINP3Q76B58 766 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 GALNT5Q7Z7M9 940 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 PLCZ1Q86YW0 608 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 ZNF567Q8N184 647 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 TRPM4Q8TD43 1214 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 TMCO6Q96DC7 493 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 C8orf37Q96NL8 207 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 ERVMER34-1Q9H9K5 563 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 INTS7Q9NVH2 962 aaKnown RBP13.1□□□□□ -0.31
IFT88-202ENST00000351808 COL20A1Q9P218 1284 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 TRMT6Q9UJA5 497 aaKnown RBP13.1□□□□□ -0.31
IFT88-202ENST00000351808 LYVE1Q9Y5Y7 322 aa13.1□□□□□ -0.31
IFT88-202ENST00000351808 OR2A25A4D2G3 310 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 RECQL5O94762 991 aaPredicted RBP13.09□□□□□ -0.31
IFT88-202ENST00000351808 TP53P04637 393 aaPredicted RBP13.09□□□□□ -0.31
IFT88-202ENST00000351808 CYP11A1P05108 521 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 PSAPP07602 524 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 CYP4B1P13584 511 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 STMN1P16949 149 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 RGS7P49802 495 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 GZMKP49863 264 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 TGFB2P61812 414 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 BNC1Q01954 994 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 CTBP1Q13363 440 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 MTMR1Q13613 665 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 TAB1Q15750 504 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 ARHGEF16Q5VV41 709 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 PAMR1Q6UXH9 720 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 TMEM179BQ7Z7N9 219 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 PROSER1Q86XN7 944 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 DTWD1Q8N5C7 304 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 SLC2A14Q8TDB8 520 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 HERVK_113Q902F9 699 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 MARC2Q969Z3 335 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 CSPG4P5Q96PW8 444 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 APOL4Q9BPW4 351 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 SCPEP1Q9HB40 452 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 B3GNT2Q9NY97 397 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 SLC23A1Q9UHI7 598 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 RNF6Q9Y252 685 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 MAN2B2Q9Y2E5 1009 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 HSPB11Q9Y547 144 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 A3GALT2U3KPV4 340 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 BET1O15155 118 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 TSC22D2O75157 780 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 ADORA3P0DMS8 318 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 GRK5P34947 590 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 EEFSECP57772 596 aaKnown RBP13.09□□□□□ -0.31
IFT88-202ENST00000351808 JAG1P78504 1218 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 DAB2P98082 770 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 FOXM1Q08050 763 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 AGAP9Q5VTM2 703 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 METTL2BQ6P1Q9 378 aaKnown RBP13.09□□□□□ -0.31
IFT88-202ENST00000351808 BLOC1S3Q6QNY0 202 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 SLC26A9Q7LBE3 791 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 FAM160B2Q86V87 743 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 NLRP8Q86W28 1048 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 DENND6AQ8IWF6 608 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 TMEM130Q8N3G9 435 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 TTLQ8NG68 377 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 OR10Z1Q8NGY1 313 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms