RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 ACOT8O14734 319 aa20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 FFAR2O15552 330 aa20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 XYLBO75191 536 aa20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 ARHGEF15O94989 841 aa20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 S100BP04271 92 aaPredicted RBP20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 C8orf82Q6P1X6 216 aaPredicted RBP20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 ZFP1Q6P2D0 407 aa20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 IZUMO2Q6UXV1 221 aa20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 ADIPOR2Q86V24 386 aa20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 PLPP6Q8IY26 295 aa20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 GDPD5Q8WTR4 605 aa20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 ROPN1LQ96C74 230 aa20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 FAM126AQ9BYI3 521 aaPredicted RBP20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 SPAG4Q9NPE6 437 aa20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 LATS2Q9NRM7 1088 aa20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 SPATS2LQ9NUQ6 558 aaKnown RBP20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 TSR3Q9UJK0 312 aaKnown RBP20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 OARD1Q9Y530 152 aa20.08■□□□□ 0.8
CHRNA3-202ENST00000348639 UGT2B4P06133 528 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 LHCGRP22888 699 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 MSX2P35548 267 aaPredicted RBP20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 NSG1P42857 185 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 UBE3AQ05086 875 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 CRY1Q16526 586 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 LY6G5CQ5SRR4 150 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 ZDHHC20Q5W0Z9 365 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 ANO7Q6IWH7 933 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 Q6ZVU0 165 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 UBE2Q1Q7Z7E8 422 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 RBM23Q86U06 439 aaKnown RBP20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 NAT16Q8N8M0 369 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 PCYOX1LQ8NBM8 494 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 MYLIPQ8WY64 445 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 DLG3Q92796 817 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 ECSITQ9BQ95 431 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 VCX3BQ9H321 246 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 BRD9Q9H8M2 597 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 ZDHHC3Q9NYG2 299 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 SUCOQ9UBS9 1254 aaKnown RBP20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 CROTQ9UKG9 612 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 PSMD13Q9UNM6 376 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 WNT6Q9Y6F9 365 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 WASH3PC4AMC7 463 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 CASQ2O14958 399 aaPredicted RBP20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 TRIM24O15164 1050 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 OR4F21O95013 312 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 HNRNPA1P09651 372 aaKnown RBP eCLIP20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 MRPL19P49406 292 aaKnown RBP20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 ERVPABLB-1P60509 514 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 PRSS36Q5K4E3 855 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 BHLHE22Q8NFJ8 381 aaPredicted RBP20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 OR52B6Q8NGF0 335 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 ASB9Q96DX5 294 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 NOL11Q9H8H0 719 aaKnown RBP20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 PTBP2Q9UKA9 531 aaKnown RBP20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 NDUFAF1Q9Y375 327 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 RWDD3Q9Y3V2 267 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 CHD9Q3L8U1 2897 aa20.07■□□□□ 0.8
CHRNA3-202ENST00000348639 LIN7AO14910 233 aaPredicted RBP20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 POLR2LP62875 67 aaKnown RBP20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 GRIK2Q13002 908 aa20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 BLMHQ13867 455 aa20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 RPS6KA2Q15349 733 aa20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 KIAA0907Q7Z7F0 614 aaPredicted RBP20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 ADGRG2Q8IZP9 1017 aa20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 CHST14Q8NCH0 376 aa20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 OR2A12Q8NGT7 310 aa20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 OTUB2Q96DC9 234 aa20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 C6orf203Q9P0P8 240 aaPredicted RBP20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 GPR45Q9Y5Y3 372 aa20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 ST14Q9Y5Y6 855 aa20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 PRRC2BQ5JSZ5 2229 aaKnown RBP20.06■□□□□ 0.8
CHRNA3-202ENST00000348639 NR5A2O00482 541 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 TCF3P15923 654 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 NME5P56597 212 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 GTF2H2Q13888 395 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 TRIM25Q14258 630 aaKnown RBP20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 C18orf21Q32NC0 220 aaPredicted RBP20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 TTLL9Q3SXZ7 439 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 ATP13A5Q4VNC0 1218 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 GTF2H2CQ6P1K8 395 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 GDPD4Q6W3E5 623 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 GOLGA7Q7Z5G4 137 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 CDYL2Q8N8U2 506 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 PBXIP1Q96AQ6 731 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 ACOX2Q99424 681 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 COPS8Q99627 209 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 RIC8BQ9NVN3 520 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 MARK1Q9P0L2 795 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 TMEM181Q9P2C4 612 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 KLHL42Q9P2K6 505 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 ZMYM5Q9UJ78 669 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 ALPK3Q96L96 1907 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 NOTCH4Q99466 2003 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 C1SP09871 688 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 TCN1P20061 433 aaPredicted RBP20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 WEE1P30291 646 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 MRPS22P82650 360 aaKnown RBP20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 LRRC73Q5JTD7 316 aa20.05■□□□□ 0.8
CHRNA3-202ENST00000348639 TMEM215Q68D42 235 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms