RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 FARSBQ9NSD9 589 aaKnown RBP10.21□□□□□ -0.78
LIMA1-201ENST00000341247 ABCB8Q9NUT2 735 aa10.21□□□□□ -0.78
LIMA1-201ENST00000341247 HACD3Q9P035 362 aa10.21□□□□□ -0.78
LIMA1-201ENST00000341247 CCDC154A6NI56 674 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 GREM1O60565 184 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 CXCL10P02778 98 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 S100BP04271 92 aaPredicted RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 HSPA8P11142 646 aaKnown RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 CCL5P13501 91 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 BPIP17213 487 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 LIN52Q52LA3 116 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 ATP6AP1LQ52LC2 224 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 ARMC3Q5W041 872 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 BLOC1S3Q6QNY0 202 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 SFRP1Q8N474 314 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 FIBCD1Q8N539 461 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 ZNF483Q8TF39 744 aaPredicted RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 STON2Q8WXE9 905 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 MRPS31Q92665 395 aaKnown RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 PPM1MQ96MI6 270 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 BTBD9Q96Q07 612 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 SEPHS2Q99611 448 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 Q9H521 79 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 HCFC1R1Q9NWW0 138 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 LZTS1Q9Y250 596 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 CCL26Q9Y258 94 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 POLR3HQ9Y535 204 aaPredicted RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 PTPRSQ13332 1948 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 ASPDHA6ND91 283 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 NPIPB15A6NHN6 443 aaPredicted RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 CCL16O15467 120 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 FFAR2O15552 330 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 FZD6O60353 706 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 SLC22A3O75751 556 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 MLYCDO95822 493 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 ZNF7P17097 686 aaPredicted RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 WEE1P30291 646 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 HMGCS1Q01581 520 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 PLOD1Q02809 727 aaPredicted RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 NFATC2Q13469 925 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 C6orf136Q5SQH8 315 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 ZBTB49Q6ZSB9 765 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 Q6ZSR9 355 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 ST13P5Q8NFI4 369 aaPredicted RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 CLHC1Q8NHS4 586 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 GRIN3AQ8TCU5 1115 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 ZDHHC6Q9H6R6 413 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 ELOVL2Q9NXB9 296 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 WWOXQ9NZC7 414 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 SPG21Q9NZD8 308 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 SUN2Q9UH99 717 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 CIDEBQ9UHD4 219 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 LSM7Q9UK45 103 aaKnown RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 INTS6Q9UL03 887 aaKnown RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 DHRS7Q9Y394 339 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 SLC4A7Q9Y6M7 1214 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 GAPDHSO14556 408 aaPredicted RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 TGM5O43548 720 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 SEC24DO94855 1032 aaPredicted RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 G6PDP11413 515 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 ITGALP20701 1170 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 HMOX2P30519 316 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 POLR2JP52435 117 aaKnown RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 MYBPC1Q00872 1141 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 GTF2H2Q13888 395 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 RAB33AQ14088 237 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 ARHGEF7Q14155 803 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 ABRAXAS2Q15018 415 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 CYP51A1Q16850 503 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 INO80DQ53TQ3 878 aaPredicted RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 GTF2H2CQ6P1K8 395 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 SBSNQ6UWP8 590 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 DCAF4L2Q8NA75 395 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 OR2T34Q8NGX1 318 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 OR2T3Q8NH03 318 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 TOP1MTQ969P6 601 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 NMD3Q96D46 503 aaKnown RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 ERLEC1Q96DZ1 483 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 MRPL40Q9NQ50 206 aaKnown RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 PAK6Q9NQU5 681 aaPredicted RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 PAPOLBQ9NRJ5 636 aaKnown RBP10.2□□□□□ -0.78
LIMA1-201ENST00000341247 SARDHQ9UL12 918 aa10.2□□□□□ -0.78
LIMA1-201ENST00000341247 OBSL1O75147 1896 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 GLYATL1P3A0A0U1RQE8 302 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 ZBBXA8MT70 800 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 PLOD2O00469 737 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 STX16O14662 325 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 TRBC1P01850 177 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 C8BP07358 591 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 SLC2A4P14672 509 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 ZNF26P17031 533 aaPredicted RBP10.19□□□□□ -0.78
LIMA1-201ENST00000341247 MTPNP58546 118 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 MILR1Q7Z6M3 343 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 CENPKQ9BS16 269 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 P2RY12Q9H244 342 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 AIG1Q9NVV5 245 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 GID8Q9NWU2 228 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 KLQ9UEF7 1012 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 SLCO3A1Q9UIG8 710 aa10.19□□□□□ -0.78
LIMA1-201ENST00000341247 PIKFYVEQ9Y2I7 2098 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms