RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 RSPH14Q9UHP6 348 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 TUBD1Q9UJT1 453 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 DNMT3AQ9Y6K1 912 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-202ENST00000337571 SLC30A1Q9Y6M5 507 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 MN1Q10571 1320 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-202ENST00000337571 AHCTF1Q8WYP5 2266 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 C2orf81A6NN90 581 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 F5H423 210 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-202ENST00000337571 H7C0C1 242 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 STX7O15400 261 aaKnown RBP10.46□□□□□ -0.73
CAPN3-202ENST00000337571 UGT1A9O60656 530 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 KATNA1O75449 491 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 POP7O75817 140 aaKnown RBP10.46□□□□□ -0.73
CAPN3-202ENST00000337571 ANXA9O76027 345 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 STK10O94804 968 aaKnown RBP10.46□□□□□ -0.73
CAPN3-202ENST00000337571 NDUFA10O95299 355 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 MT-ND3P03897 115 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 BRAFP15056 766 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 PECAM1P16284 738 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-202ENST00000337571 UGT1A6P19224 532 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 HLA-DPA1P20036 260 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 MSH3P20585 1137 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 UGT1A1P22309 533 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 UGT1A4P22310 534 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 CTNNA2P26232 953 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 AKT1P31749 480 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 CD68P34810 354 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-202ENST00000337571 DLSTP36957 453 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 CETN2P41208 172 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 ATP5OP48047 213 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 LEPRP48357 1165 aaKnown RBP10.46□□□□□ -0.73
CAPN3-202ENST00000337571 HADHBP55084 474 aaKnown RBP10.46□□□□□ -0.73
CAPN3-202ENST00000337571 WASHC5Q12768 1159 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 XRCC4Q13426 336 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 GPR18Q14330 331 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 PRPSAP1Q14558 356 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 PLCL1Q15111 1095 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 SLC1A5Q15758 541 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 CHRNA6Q15825 494 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 TAZQ16635 292 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 LONRF2Q1L5Z9 754 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 DEFB109BQ30KR1 87 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 KHDC1Q4VXA5 237 aaKnown RBP10.46□□□□□ -0.73
CAPN3-202ENST00000337571 TMEM220Q6QAJ8 160 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 KDELC1Q6UW63 502 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 FAM151BQ6UXP7 276 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 DAAM2Q86T65 1068 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 PACS2Q86VP3 889 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 ZNF567Q8N184 647 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 RASGEF1AQ8N9B8 481 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 ZNF398Q8TD17 642 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 STARD8Q92502 1023 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 WNT2BQ93097 391 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 LRRC45Q96CN5 670 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 HAUS1Q96CS2 278 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 ZNF514Q96K75 400 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-202ENST00000337571 TRIM5Q9C035 493 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 ZNF768Q9H5H4 540 aaKnown RBP10.46□□□□□ -0.73
CAPN3-202ENST00000337571 UGT1A7Q9HAW7 530 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 UGT1A10Q9HAW8 530 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 UGT1A8Q9HAW9 530 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 PDE7BQ9NP56 450 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 OGFRQ9NZT2 677 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 IL17CQ9P0M4 197 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 PADI1Q9ULC6 663 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 PCDHA13Q9Y5I0 950 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 RPS6KL1Q9Y6S9 549 aa10.46□□□□□ -0.73
CAPN3-202ENST00000337571 KLHL33A6NCF5 533 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 OR2AG2A6NM03 316 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 BUD23O43709 281 aaKnown RBP10.45□□□□□ -0.74
CAPN3-202ENST00000337571 IPO7O95373 1038 aaKnown RBP10.45□□□□□ -0.74
CAPN3-202ENST00000337571 PTMAP06454 111 aaKnown RBP10.45□□□□□ -0.74
CAPN3-202ENST00000337571 FECHP22830 423 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 CYLC1P35663 651 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-202ENST00000337571 STAT5AP42229 794 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 CHRNA4P43681 627 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 CAPZBP47756 277 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 GEMP55040 296 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 NAP1L1P55209 391 aaKnown RBP10.45□□□□□ -0.74
CAPN3-202ENST00000337571 SH3BP2P78314 561 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 CDC20Q12834 499 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 KRT33BQ14525 404 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 NOMO1Q15155 1222 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 CRTC2Q53ET0 693 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-202ENST00000337571 FNBP1LQ5T0N5 605 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 ITPRIPL1Q6GPH6 555 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 ARMC6Q6NXE6 501 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 BPHLQ86WA6 291 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-202ENST00000337571 PPP1R3BQ86XI6 285 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 CCDC170Q8IYT3 715 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 TTC30BQ8N4P2 665 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 SIDT2Q8NBJ9 832 aaKnown RBP10.45□□□□□ -0.74
CAPN3-202ENST00000337571 GALNT6Q8NCL4 622 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 C9orf43Q8TAL5 461 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-202ENST00000337571 KLHL6Q8WZ60 621 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 UBXN4Q92575 508 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 CALR3Q96L12 384 aaKnown RBP10.45□□□□□ -0.74
CAPN3-202ENST00000337571 MRGPRX2Q96LB1 330 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 HEMGNQ9BXL5 484 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 RAB33BQ9H082 229 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms