RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ERVW-1Q9UQF0 538 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 USP20Q9Y2K6 914 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 AKAP8O43823 692 aaKnown RBP12.96□□□□□ -0.34
HLCS-201ENST00000336648 AP2A2O94973 939 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 ANGPTL1O95841 491 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 RGS8P57771 180 aaPredicted RBP12.96□□□□□ -0.34
HLCS-201ENST00000336648 DLG2Q15700 870 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 SLITRK4Q8IW52 837 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 IQCKQ8N0W5 287 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 ZNF567Q8N184 647 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 TMIEQ8NEW7 156 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 OR5B17Q8NGF7 314 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 SNX33Q8WV41 574 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 TSEN15Q8WW01 171 aaKnown RBP12.96□□□□□ -0.34
HLCS-201ENST00000336648 DNAJA4Q8WW22 397 aaPredicted RBP12.96□□□□□ -0.34
HLCS-201ENST00000336648 EZH1Q92800 747 aaPredicted RBP12.96□□□□□ -0.34
HLCS-201ENST00000336648 TMCO6Q96DC7 493 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 PAK6Q9NQU5 681 aaPredicted RBP12.96□□□□□ -0.34
HLCS-201ENST00000336648 FAM105AQ9NUU6 356 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 CEP152O94986 1710 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 OR2AT4A6NND4 320 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 TSPAN8P19075 237 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 CD247P20963 164 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 PDX1P52945 283 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 MAXP61244 160 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 PPP3R1P63098 170 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 VGLL4Q14135 290 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 GK5Q6ZS86 529 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 PPTC7Q8NI37 304 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 MGME1Q9BQP7 344 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 TAPBPLQ9BX59 468 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 ZNF350Q9GZX5 532 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 SLC25A51Q9H1U9 297 aa12.96□□□□□ -0.34
HLCS-201ENST00000336648 KANTRA0A1W2PQU2 76 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 PPEF2O14830 753 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 NFATC1O95644 943 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 CYP4B1P13584 511 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 MAGP20916 626 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 USP4Q13107 963 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 EIPR1Q53HC9 387 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 ZBTB46Q86UZ6 589 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 P2RY8Q86VZ1 359 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 C12orf50Q8NA57 414 aaPredicted RBP12.95□□□□□ -0.34
HLCS-201ENST00000336648 FAM13CQ8NE31 585 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 ING5Q8WYH8 240 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 COMMD4Q9H0A8 199 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 A0A1W2PPM1 405 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 PRORSD1PA6NEY8 169 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 CHD1O14646 1710 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 TLX3O43711 291 aaPredicted RBP12.95□□□□□ -0.34
HLCS-201ENST00000336648 CCNB2O95067 398 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 C8GP07360 202 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 MPSTP25325 297 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 LIPEQ05469 1076 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 KLHL22Q53GT1 634 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 ADGRG6Q86SQ4 1221 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 OR10G6Q8NH81 332 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 METTL21AQ8WXB1 218 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 AZIN2Q96A70 460 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 TSSK3Q96PN8 268 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 EIF2B3Q9NR50 452 aaKnown RBP12.95□□□□□ -0.34
HLCS-201ENST00000336648 SLC17A7Q9P2U7 560 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 TNFSF9P41273 254 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 PHC1P78364 1004 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 SRSF11Q05519 484 aaKnown RBP12.95□□□□□ -0.34
HLCS-201ENST00000336648 BNIP1Q12981 228 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 ADNP2Q6IQ32 1131 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 IPCEF1Q8WWN9 437 aaPredicted RBP12.95□□□□□ -0.34
HLCS-201ENST00000336648 AKT1S1Q96B36 256 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 MAGEH1Q9H213 219 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 MKLN1Q9UL63 735 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 PCDHGB7Q9Y5F8 929 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 BANF1O75531 89 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 RLN2P04090 185 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 VARSP26640 1264 aaKnown RBP12.95□□□□□ -0.34
HLCS-201ENST00000336648 GLUD2P49448 558 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 CDH13P55290 713 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 C2orf80Q0P641 193 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 TCEAL6Q6IPX3 200 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 HMBOX1Q6NT76 420 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 CXCL17Q6UXB2 119 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 CMC1Q7Z7K0 106 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 C15orf40Q8WUR7 153 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 NXNL1Q96CM4 212 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 ZNF446Q9NWS9 450 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 TCAF1Q9Y4C2 921 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 KIAA1210Q9ULL0 1709 aa12.95□□□□□ -0.34
HLCS-201ENST00000336648 KCNA5P22460 613 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 NDST2P52849 883 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 CYP4F8P98187 520 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 TMPRSS11BQ86T26 416 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 MPP5Q8N3R9 675 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 CCDC54Q8NEL0 328 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 RAI2Q9Y5P3 530 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 ZC3H13Q5T200 1668 aaKnown RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 DDNO94850 711 aaPredicted RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 ZNF155Q12901 538 aaPredicted RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 PAMR1Q6UXH9 720 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 XYLT1Q86Y38 959 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms