RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 COPS8Q99627 209 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 C19orf43Q9BQ61 176 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 TBC1D10AQ9BXI6 508 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 TLR10Q9BXR5 811 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 DPH1Q9BZG8 443 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 EPB41L1Q9H4G0 881 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 FAM96AQ9H5X1 160 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 ETNK1Q9HBU6 452 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 WASH6PQ9NQA3 447 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 RAB6BQ9NRW1 208 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 POT1Q9NUX5 634 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 PAK5Q9P286 719 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 ZNF624Q9P2J8 865 aaPredicted RBP11.15□□□□□ -0.62
MRPL55-203ENST00000336520 PSMD13Q9UNM6 376 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 DNMT3AQ9Y6K1 912 aaPredicted RBP11.15□□□□□ -0.62
MRPL55-203ENST00000336520 IGSF10Q6WRI0 2623 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 AHCTF1Q8WYP5 2266 aa11.15□□□□□ -0.62
MRPL55-203ENST00000336520 ZNF106Q9H2Y7 1883 aaKnown RBP11.15□□□□□ -0.63
MRPL55-203ENST00000336520 PRAMEF33A0A0G2JMD5 474 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 CCDC78A2IDD5 438 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 PRR19A6NJB7 356 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 A8MU76 341 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 NVLO15381 856 aaKnown RBP11.14□□□□□ -0.63
MRPL55-203ENST00000336520 PRAMEF10O60809 474 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 APRTP07741 180 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 CCL4P13236 92 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 ETS1P14921 441 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 BRAFP15056 766 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 AMD1P17707 334 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 CXCR5P32302 372 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 TMPRSS3P57727 454 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 CXADRP78310 365 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 DMPKQ09013 629 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 CDH17Q12864 832 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 NFE2L1Q14494 772 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 CCNG2Q16589 344 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 GPR33Q49SQ1 333 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 ZRANB3Q5FWF4 1079 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 FAM83HQ6ZRV2 1179 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-203ENST00000336520 PRUNE1Q86TP1 453 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 FAM129CQ86XR2 697 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 RBM12BQ8IXT5 1001 aaKnown RBP11.14□□□□□ -0.63
MRPL55-203ENST00000336520 NAT14Q8WUY8 206 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 HEXDCQ8WVB3 486 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 USP7Q93009 1102 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 UCK1Q9HA47 277 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 NLE1Q9NVX2 485 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-203ENST00000336520 KLHL3Q9UH77 587 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 WDR37Q9Y2I8 494 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 ZKSCAN5Q9Y2L8 839 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 BPTFQ12830 3046 aa11.14□□□□□ -0.63
MRPL55-203ENST00000336520 CACNA1GO43497 2377 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 KLHL33A6NCF5 533 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 MGAT4DA6NG13 374 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 UBXN7O94888 489 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 SLC35G4P0C7Q5 338 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 TYRP1P17643 537 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 CACNG1Q06432 222 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 CLN3Q13286 438 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 SEMA5AQ13591 1074 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 LAMB3Q13751 1172 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 GPR18Q14330 331 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 CLCA4Q14CN2 919 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 SIX1Q15475 284 aaPredicted RBP11.13□□□□□ -0.63
MRPL55-203ENST00000336520 SKIDA1Q1XH10 827 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 BCL7AQ4VC05 210 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 CCDC38Q502W7 563 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 SERPINA9Q86WD7 417 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 PLXDC1Q8IUK5 500 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 STYXQ8WUJ0 223 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 ANP32BQ92688 251 aaKnown RBP11.13□□□□□ -0.63
MRPL55-203ENST00000336520 ART4Q93070 314 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 TAAR9Q96RI9 348 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 PRORYQ9H606 182 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 CPNE5Q9HCH3 593 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 SLC40A1Q9NP59 571 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 IMP3Q9NV31 184 aaKnown RBP11.13□□□□□ -0.63
MRPL55-203ENST00000336520 ZDHHC3Q9NYG2 299 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 FOXJ2Q9P0K8 574 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 PDP2Q9P2J9 529 aa11.13□□□□□ -0.63
MRPL55-203ENST00000336520 CELSR3Q9NYQ7 3312 aa11.12□□□□□ -0.63
MRPL55-203ENST00000336520 HEATR9A2RTY3 570 aa11.12□□□□□ -0.63
MRPL55-203ENST00000336520 MROH6A6NGR9 719 aa11.12□□□□□ -0.63
MRPL55-203ENST00000336520 EFCAB7A8K855 629 aa11.12□□□□□ -0.63
MRPL55-203ENST00000336520 AGAP14A8MT82 685 aa11.12□□□□□ -0.63
MRPL55-203ENST00000336520 C9orf172C9J069 976 aa11.12□□□□□ -0.63
MRPL55-203ENST00000336520 H7C0S8 307 aa11.12□□□□□ -0.63
MRPL55-203ENST00000336520 SUN1O94901 812 aa11.12□□□□□ -0.63
MRPL55-203ENST00000336520 POLBP06746 335 aa11.12□□□□□ -0.63
MRPL55-203ENST00000336520 ZSCAN5DPP0CG00 497 aa11.12□□□□□ -0.63
MRPL55-203ENST00000336520 FGF3P11487 239 aaPredicted RBP11.12□□□□□ -0.63
MRPL55-203ENST00000336520 ATP1B2P14415 290 aaPredicted RBP11.12□□□□□ -0.63
MRPL55-203ENST00000336520 MSNP26038 577 aaKnown RBP11.12□□□□□ -0.63
MRPL55-203ENST00000336520 ACRV1P26436 265 aa11.12□□□□□ -0.63
MRPL55-203ENST00000336520 CD82P27701 267 aa11.12□□□□□ -0.63
MRPL55-203ENST00000336520 RPL22P35268 128 aaKnown RBP11.12□□□□□ -0.63
MRPL55-203ENST00000336520 PRLHRP49683 370 aa11.12□□□□□ -0.63
MRPL55-203ENST00000336520 CDKN1CP49918 316 aaPredicted RBP11.12□□□□□ -0.63
MRPL55-203ENST00000336520 BASP1P80723 227 aaKnown RBP11.12□□□□□ -0.63
MRPL55-203ENST00000336520 PLCL1Q15111 1095 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms