RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 NAF1Q96HR8 494 aaKnown RBP12.42□□□□□ -0.42
LIMK1-201ENST00000336180 RTKNQ9BST9 563 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 DERL2Q9GZP9 239 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 ELOVL2Q9NXB9 296 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 NDE1Q9NXR1 346 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 PIKFYVEQ9Y2I7 2098 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 UBTFL6P0CB48 400 aaPredicted RBP12.42□□□□□ -0.42
LIMK1-201ENST00000336180 PTPN2P17706 415 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 ITGALP20701 1170 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 WASP42768 502 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 ERVPABLB-1P60509 514 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 ARHGEF7Q14155 803 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 TRMT5Q32P41 509 aaKnown RBP12.42□□□□□ -0.42
LIMK1-201ENST00000336180 ACBD5Q5T8D3 534 aaPredicted RBP12.42□□□□□ -0.42
LIMK1-201ENST00000336180 REP15Q6BDI9 236 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 FUNDC1Q8IVP5 155 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 CLYBLQ8N0X4 340 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 ENDOVQ8N8Q3 282 aaKnown RBP12.42□□□□□ -0.42
LIMK1-201ENST00000336180 CLHC1Q8NHS4 586 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 CCDC126Q96EE4 140 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 SPATA16Q9BXB7 569 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 SEMA6AQ9H2E6 1030 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 TFB2MQ9H5Q4 396 aaKnown RBP12.42□□□□□ -0.42
LIMK1-201ENST00000336180 ZNF385DQ9H6B1 395 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 SPHK2Q9NRA0 654 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 SLAMF8Q9P0V8 285 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 STOML1Q9UBI4 398 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 EGFL7Q9UHF1 273 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 USP22Q9UPT9 525 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 HSPA8P11142 646 aaKnown RBP12.41□□□□□ -0.42
LIMK1-201ENST00000336180 SNRPD1P62314 119 aaKnown RBP12.41□□□□□ -0.42
LIMK1-201ENST00000336180 HTRA4P83105 476 aaPredicted RBP12.41□□□□□ -0.42
LIMK1-201ENST00000336180 TSTA3Q13630 321 aaPredicted RBP12.41□□□□□ -0.42
LIMK1-201ENST00000336180 FLOT2Q14254 428 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 ADIPOR2Q86V24 386 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 MAGEC3Q8TD91 643 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 ACDQ96AP0 544 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 MEAF6Q9HAF1 191 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 MAGEE1Q9HCI5 957 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 HSFX1Q9UBD0 423 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 SORCS3Q9UPU3 1222 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 KPNA3O00505 521 aaPredicted RBP12.41□□□□□ -0.42
LIMK1-201ENST00000336180 TXNDC9O14530 226 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 MRASO14807 208 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 SUOXP51687 545 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 HMGCS1Q01581 520 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 PTK2BQ14289 1009 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 TRIP10Q15642 601 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 GRAMD1BQ3KR37 738 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 PUS10Q3MIT2 529 aaKnown RBP12.41□□□□□ -0.42
LIMK1-201ENST00000336180 LARP4Q71RC2 724 aaKnown RBP eCLIP12.41□□□□□ -0.42
LIMK1-201ENST00000336180 HSD11B1LQ7Z5J1 315 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 PELI3Q8N2H9 469 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 OR2A12Q8NGT7 310 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 GDPD5Q8WTR4 605 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 P2RY12Q9H244 342 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 COPS7BQ9H9Q2 264 aaPredicted RBP12.41□□□□□ -0.42
LIMK1-201ENST00000336180 S100A14Q9HCY8 104 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 SLC25A13Q9UJS0 675 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 PCTPQ9UKL6 214 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 ASB3Q9Y575 518 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 TMEM202A6NGA9 273 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 CAPN1P07384 714 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 VHLP40337 213 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 PTGER3P43115 390 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 PSME3P61289 254 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 B4GALNT1Q00973 533 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 TLDC1Q6P9B6 456 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 IL27RAQ6UWB1 636 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 LMNTD2Q8IXW0 634 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 SLC22A15Q8IZD6 547 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 RP9Q8TA86 221 aaKnown RBP12.41□□□□□ -0.42
LIMK1-201ENST00000336180 L3HYPDHQ96EM0 354 aa12.41□□□□□ -0.42
LIMK1-201ENST00000336180 RSRC1Q96IZ7 334 aaKnown RBP12.41□□□□□ -0.42
LIMK1-201ENST00000336180 STX18Q9P2W9 335 aaKnown RBP12.41□□□□□ -0.42
LIMK1-201ENST00000336180 CAPN8A6NHC0 703 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 TPST1O60507 370 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 CTSLP07711 333 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 C1SP09871 688 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 ZNF7P17097 686 aaPredicted RBP12.4□□□□□ -0.42
LIMK1-201ENST00000336180 CAPN3P20807 821 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 SLC7A2P52569 658 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 HK2P52789 917 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 UFM1P61960 85 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 AP2B1P63010 937 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 LCP2Q13094 533 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 GRIN2CQ14957 1233 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 TCEA2Q15560 299 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 CARD16Q5EG05 197 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 METTL21CQ5VZV1 264 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 PGM2L1Q6PCE3 622 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.4□□□□□ -0.42
LIMK1-201ENST00000336180 AFAP1L2Q8N4X5 818 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 DNAJB14Q8TBM8 379 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 METTL6Q8TCB7 284 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 CLP1Q92989 425 aaKnown RBP12.4□□□□□ -0.42
LIMK1-201ENST00000336180 NXPE3Q969Y0 559 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 ARMC5Q96C12 935 aa12.4□□□□□ -0.42
LIMK1-201ENST00000336180 MAELQ96JY0 434 aaKnown RBP12.4□□□□□ -0.42
LIMK1-201ENST00000336180 MRPL1Q9BYD6 325 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms