RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 PELI3Q8N2H9 469 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 AGAP4Q96P64 663 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 NPAS2Q99743 824 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 MKRN2Q9H000 416 aaKnown RBP20.42■□□□□ 0.86
SPNS1-203ENST00000334536 AGO3Q9H9G7 860 aaKnown RBP20.42■□□□□ 0.86
SPNS1-203ENST00000334536 TMEM181Q9P2C4 612 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 CAB39Q9Y376 341 aaPredicted RBP20.42■□□□□ 0.86
SPNS1-203ENST00000334536 HS3ST4Q9Y661 456 aa20.42■□□□□ 0.86
SPNS1-203ENST00000334536 RAD51BO15315 384 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 JUNP05412 331 aaKnown RBP20.41■□□□□ 0.86
SPNS1-203ENST00000334536 LTA4HP09960 611 aaKnown RBP20.41■□□□□ 0.86
SPNS1-203ENST00000334536 SLC2A3P11169 496 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 IL32P24001 234 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 MAPK10P53779 464 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 GNASQ5JWF2 1037 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 TBCELQ5QJ74 424 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 NEK5Q6P3R8 708 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 CNSTQ6PJW8 725 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 SLC22A9Q8IVM8 553 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 REM2Q8IYK8 340 aaPredicted RBP20.41■□□□□ 0.86
SPNS1-203ENST00000334536 UMODL1-AS1Q8N2C9 162 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 SVOPQ8N4V2 548 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 IMP4Q96G21 291 aaKnown RBP20.41■□□□□ 0.86
SPNS1-203ENST00000334536 DEPDC7Q96QD5 511 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 C2orf49Q9BVC5 232 aaPredicted RBP20.41■□□□□ 0.86
SPNS1-203ENST00000334536 NDFIP2Q9NV92 336 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 DGKBQ9Y6T7 804 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 DOCK3Q8IZD9 2030 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 A0A0U1RQF3 1178 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 EEF1B2P24534 225 aaKnown RBP20.41■□□□□ 0.86
SPNS1-203ENST00000334536 SLC26A3P40879 764 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 CHRNA4P43681 627 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 SERPINH1P50454 418 aaKnown RBP20.41■□□□□ 0.86
SPNS1-203ENST00000334536 AP2S1P53680 142 aaPredicted RBP20.41■□□□□ 0.86
SPNS1-203ENST00000334536 CLCQ05315 142 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 SMU1Q2TAY7 513 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 PAN2Q504Q3 1202 aaKnown RBP20.41■□□□□ 0.86
SPNS1-203ENST00000334536 NDUFAF5Q5TEU4 345 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 PTAR1Q7Z6K3 402 aaPredicted RBP20.41■□□□□ 0.86
SPNS1-203ENST00000334536 DACH2Q96NX9 599 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 MEAF6Q9HAF1 191 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 SPC25Q9HBM1 224 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 SYTL2Q9HCH5 934 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 ATP13A2Q9NQ11 1180 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 GTSE1Q9NYZ3 720 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 PADI3Q9ULW8 664 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 PCDHB8Q9UN66 801 aa20.41■□□□□ 0.86
SPNS1-203ENST00000334536 TRPM7Q96QT4 1865 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 PTPRDP23468 1912 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 PRORSD1PA6NEY8 169 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 IPO13O94829 963 aaKnown RBP20.4■□□□□ 0.86
SPNS1-203ENST00000334536 KCNK2O95069 426 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 RPS9P46781 194 aaKnown RBP20.4■□□□□ 0.86
SPNS1-203ENST00000334536 CSHL1Q14406 222 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 GALNT3Q14435 633 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 SQLEQ14534 574 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 ACAP2Q15057 778 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 MSANTD2Q6P1R3 559 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 PIWIL3Q7Z3Z3 882 aaKnown RBP20.4■□□□□ 0.86
SPNS1-203ENST00000334536 FAM109AQ8N4B1 249 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 SPATA6LQ8N4H0 392 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 OR7A2PQ8NGA2 310 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 CANT1Q8WVQ1 401 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 HDAC2Q92769 488 aaKnown RBP20.4■□□□□ 0.86
SPNS1-203ENST00000334536 TRMOQ9BU70 441 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 CHID1Q9BWS9 393 aa20.4■□□□□ 0.86
SPNS1-203ENST00000334536 PAK1IP1Q9NWT1 392 aaPredicted RBP20.4■□□□□ 0.86
SPNS1-203ENST00000334536 SLC7A4O43246 635 aa20.39■□□□□ 0.86
SPNS1-203ENST00000334536 PEX11BO96011 259 aa20.39■□□□□ 0.86
SPNS1-203ENST00000334536 RHOQP17081 205 aa20.39■□□□□ 0.86
SPNS1-203ENST00000334536 PSMA4P25789 261 aaKnown RBP20.39■□□□□ 0.86
SPNS1-203ENST00000334536 ARL1P40616 181 aaPredicted RBP20.39■□□□□ 0.86
SPNS1-203ENST00000334536 MRPS15P82914 257 aaKnown RBP20.39■□□□□ 0.86
SPNS1-203ENST00000334536 RAD51Q06609 339 aa20.39■□□□□ 0.86
SPNS1-203ENST00000334536 SPATS1Q496A3 300 aa20.39■□□□□ 0.86
SPNS1-203ENST00000334536 RBM20Q5T481 1227 aaKnown RBP20.39■□□□□ 0.86
SPNS1-203ENST00000334536 C8orf82Q6P1X6 216 aaPredicted RBP20.39■□□□□ 0.86
SPNS1-203ENST00000334536 UBE2Q1Q7Z7E8 422 aa20.39■□□□□ 0.86
SPNS1-203ENST00000334536 OR6F1Q8NGZ6 308 aa20.39■□□□□ 0.86
SPNS1-203ENST00000334536 CACNA2D2Q9NY47 1150 aa20.39■□□□□ 0.86
SPNS1-203ENST00000334536 WARS2Q9UGM6 360 aaKnown RBP20.39■□□□□ 0.86
SPNS1-203ENST00000334536 TLR6Q9Y2C9 796 aa20.39■□□□□ 0.86
SPNS1-203ENST00000334536 SCN10AQ9Y5Y9 1956 aa20.39■□□□□ 0.86
SPNS1-203ENST00000334536 DHRS12A0PJE2 317 aa20.39■□□□□ 0.85
SPNS1-203ENST00000334536 A8MT66 165 aa20.39■□□□□ 0.85
SPNS1-203ENST00000334536 M0R3G1 203 aa20.39■□□□□ 0.85
SPNS1-203ENST00000334536 NDST3O95803 873 aa20.39■□□□□ 0.85
SPNS1-203ENST00000334536 CD52P31358 61 aa20.39■□□□□ 0.85
SPNS1-203ENST00000334536 TAF1CQ15572 869 aaPredicted RBP20.39■□□□□ 0.85
SPNS1-203ENST00000334536 CXCL17Q6UXB2 119 aa20.39■□□□□ 0.85
SPNS1-203ENST00000334536 ADCK1Q86TW2 530 aa20.39■□□□□ 0.85
SPNS1-203ENST00000334536 OFCC1Q8IZS5 231 aa20.39■□□□□ 0.85
SPNS1-203ENST00000334536 LGI2Q8N0V4 545 aa20.39■□□□□ 0.85
SPNS1-203ENST00000334536 SPPL2BQ8TCT7 592 aa20.39■□□□□ 0.85
SPNS1-203ENST00000334536 JPH3Q8WXH2 748 aaPredicted RBP20.39■□□□□ 0.85
SPNS1-203ENST00000334536 SLC39A13Q96H72 371 aa20.39■□□□□ 0.85
SPNS1-203ENST00000334536 UBXN10Q96LJ8 280 aa20.39■□□□□ 0.85
SPNS1-203ENST00000334536 INTS10Q9NVR2 710 aaKnown RBP20.39■□□□□ 0.85
SPNS1-203ENST00000334536 MPP6Q9NZW5 540 aa20.39■□□□□ 0.85
SPNS1-203ENST00000334536 ZNF639Q9UID6 485 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms