RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 CCDC126Q96EE4 140 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 UBXN10Q96LJ8 280 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 MRPL57Q9BQC6 102 aaKnown RBP17.79■□□□□ 0.44
SYNE4-201ENST00000324444 TPSD1Q9BZJ3 242 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 ARRDC1-AS1Q9H2J1 176 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 TRIM39Q9HCM9 518 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 USP36Q9P275 1121 aaKnown RBP17.79■□□□□ 0.44
SYNE4-201ENST00000324444 PLXNA2O75051 1894 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 NUMA1Q14980 2115 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 PLXND1Q9Y4D7 1925 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 KLHL33A6NCF5 533 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 GPR89AB7ZAQ6 455 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 SHOX2O60902 331 aaPredicted RBP17.79■□□□□ 0.44
SYNE4-201ENST00000324444 GPR89BP0CG08 455 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 CCDC166P0CW27 439 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 ZNF37AP17032 561 aaPredicted RBP17.79■□□□□ 0.44
SYNE4-201ENST00000324444 TAC1P20366 129 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 ETV4P43268 484 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 TPMTP51580 245 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 FOXK2Q01167 660 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 CSRP2Q16527 193 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 TMEM259Q4ZIN3 620 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 USP39Q53GS9 565 aaKnown RBP17.79■□□□□ 0.44
SYNE4-201ENST00000324444 PNCKQ6P2M8 343 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 PRR23CQ6ZRP0 262 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 TRIM69Q86WT6 500 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 HMGB4Q8WW32 186 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 PDLIM5Q96HC4 596 aaKnown RBP17.79■□□□□ 0.44
SYNE4-201ENST00000324444 HIC2Q96JB3 615 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 LOXL4Q96JB6 756 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 SCYL1Q96KG9 808 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 LENG8Q96PV6 779 aaPredicted RBP17.79■□□□□ 0.44
SYNE4-201ENST00000324444 GPR21Q99679 349 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 SLC17A9Q9BYT1 436 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 DERL2Q9GZP9 239 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 MRPL46Q9H2W6 279 aaKnown RBP17.79■□□□□ 0.44
SYNE4-201ENST00000324444 SLC17A7Q9P2U7 560 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 CDV3Q9UKY7 258 aaKnown RBP17.79■□□□□ 0.44
SYNE4-201ENST00000324444 INVSQ9Y283 1065 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 COQ6Q9Y2Z9 468 aa17.79■□□□□ 0.44
SYNE4-201ENST00000324444 SPTBN2O15020 2390 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 A0A1W2PQU0 124 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 FADS2P1A8MWK0 482 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 TOR1BO14657 336 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 H2AFYO75367 372 aaKnown RBP17.78■□□□□ 0.44
SYNE4-201ENST00000324444 EPN2O95208 641 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 WISP3O95389 354 aaPredicted RBP17.78■□□□□ 0.44
SYNE4-201ENST00000324444 F7P08709 466 aaPredicted RBP17.78■□□□□ 0.44
SYNE4-201ENST00000324444 ENO3P13929 434 aaPredicted RBP17.78■□□□□ 0.44
SYNE4-201ENST00000324444 SDHBP21912 280 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 SERPINB4P48594 390 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 WDR4P57081 412 aaKnown RBP17.78■□□□□ 0.44
SYNE4-201ENST00000324444 GABPB1Q06547 395 aaPredicted RBP17.78■□□□□ 0.44
SYNE4-201ENST00000324444 CCDC6Q16204 474 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 PDK4Q16654 411 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 PLK5Q496M5 336 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 ATG16L1Q676U5 607 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 RGS9BPQ6ZS82 235 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 CDHR3Q6ZTQ4 885 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 OTOAQ7RTW8 1153 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 ARMC2Q8NEN0 867 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 LRRC8CQ8TDW0 803 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 ZC3H10Q96K80 434 aaKnown RBP17.78■□□□□ 0.44
SYNE4-201ENST00000324444 TFB2MQ9H5Q4 396 aaKnown RBP17.78■□□□□ 0.44
SYNE4-201ENST00000324444 TMCO1Q9UM00 188 aa17.78■□□□□ 0.44
SYNE4-201ENST00000324444 GPR39O43194 453 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 NIPSNAP2O75323 286 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 TRIM16O95361 564 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 PROCP04070 461 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 CPA3P15088 417 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 LSP1P33241 339 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 MAPK9P45984 424 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 PLOD1Q02809 727 aaPredicted RBP17.77■□□□□ 0.43
SYNE4-201ENST00000324444 TMEM115Q12893 351 aaPredicted RBP17.77■□□□□ 0.43
SYNE4-201ENST00000324444 CSHL1Q14406 222 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 PLEKHS1Q5SXH7 462 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 NUDCD3Q8IVD9 361 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 CENPLQ8N0S6 344 aaPredicted RBP17.77■□□□□ 0.43
SYNE4-201ENST00000324444 ZBTB2Q8N680 514 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 RHEBL1Q8TAI7 183 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 KCTD4Q8WVF5 259 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 NXNL1Q96CM4 212 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 SPACA7Q96KW9 195 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 BOCQ9BWV1 1114 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 NSRP1Q9H0G5 558 aaKnown RBP17.77■□□□□ 0.43
SYNE4-201ENST00000324444 DUSP15Q9H1R2 295 aaPredicted RBP17.77■□□□□ 0.43
SYNE4-201ENST00000324444 CD93Q9NPY3 652 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 PHPT1Q9NRX4 125 aaPredicted RBP17.77■□□□□ 0.43
SYNE4-201ENST00000324444 TMEM216Q9P0N5 145 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 TMPRSS11EQ9UL52 423 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 GPR34Q9UPC5 381 aa17.77■□□□□ 0.43
SYNE4-201ENST00000324444 TRPM6Q9BX84 2022 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.76■□□□□ 0.43
SYNE4-201ENST00000324444 SYCE1LA8MT33 242 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 C10orf142B7Z368 130 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 CDK14O94921 469 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 MYL2P10916 166 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 CLCN7P51798 805 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 IRF9Q00978 393 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 WSCD2Q2TBF2 565 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms