RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 MED11Q9P086 117 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 PTPRZ1P23471 2315 aaPredicted RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 A0A0J9YYE9 177 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 F8VP50 259 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 ORC5O43913 435 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 COQ9O75208 318 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 ENDOD1O94919 500 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 OR5F1O95221 314 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 GOT1P17174 413 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 SOX11P35716 441 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 CTSKP43235 329 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 MAPK12P53778 367 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 DDR1Q08345 913 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 MAPK14Q16539 360 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 NRF1Q16656 503 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 PDE12Q6L8Q7 609 aaKnown RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 TMEM126BQ8IUX1 230 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 ZBTB2Q8N680 514 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 PEX13Q92968 403 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 CENPNQ96H22 339 aaPredicted RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 PET100P0DJ07 73 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 NOMO3P69849 1222 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 FAM98AQ8NCA5 519 aaKnown RBP12.49□□□□□ -0.41
FN1-201ENST00000323926 MIPEPQ99797 713 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 SALL3Q9BXA9 1300 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 TEX13CA0A0J9YWL9 993 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 AP5Z1O43299 807 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 TSPAN1O60635 241 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 SCGB2A1O75556 95 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 FABP3P05413 133 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 TAS2R50P59544 299 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 GHRHRQ02643 423 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 GRSF1Q12849 480 aaKnown RBP eCLIP12.49□□□□□ -0.41
FN1-201ENST00000323926 TMEM164Q5U3C3 297 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 CYP2R1Q6VVX0 501 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 PYDC1Q8WXC3 89 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 FAM136AQ96C01 138 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 ALG2Q9H553 416 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 FARSBQ9NSD9 589 aaKnown RBP12.49□□□□□ -0.41
FN1-201ENST00000323926 LGALS13Q9UHV8 139 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.49□□□□□ -0.41
FN1-201ENST00000323926 CASKO14936 926 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 CYP17A1P05093 508 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 IGFBP5P24593 272 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 TIE1P35590 1138 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 RHBDL3P58872 404 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 ORC1Q13415 861 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 TRABD2AQ86V40 505 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 SMG7Q92540 1137 aaKnown RBP12.49□□□□□ -0.41
FN1-201ENST00000323926 PRDM12Q9H4Q4 367 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 SMPD4Q9NXE4 827 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 AKT2P31751 481 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 NDUFV1P49821 464 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 MTM1Q13496 603 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 AMIGO1Q86WK6 493 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 FLCNQ8NFG4 579 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 SP140LQ9H930 580 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 TRIM39Q9HCM9 518 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 NUAK1O60285 661 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 FOXM1Q08050 763 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 SLC25A25Q6KCM7 469 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 DOK6Q6PKX4 331 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 FBXO30Q8TB52 745 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 NEK7Q8TDX7 302 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 MBOAT7Q96N66 472 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 BLOC1S4Q9NUP1 217 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 ARMCX1Q9P291 453 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 MEIS2O14770 477 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 SLC7A4O43246 635 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 PGM3O95394 542 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 MAPK3P27361 379 aaPredicted RBP12.49□□□□□ -0.41
FN1-201ENST00000323926 ILF3Q12906 894 aaKnown RBP eCLIP12.49□□□□□ -0.416e-9■■■■■ 27.7
FN1-201ENST00000323926 RPL13AP3Q6NVV1 102 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 CNSTQ6PJW8 725 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 KIAA1324Q6UXG2 1013 aaKnown RBP12.49□□□□□ -0.41
FN1-201ENST00000323926 LRRC55Q6ZSA7 311 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 ANKS1BQ7Z6G8 1248 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 MCFD2Q8NI22 146 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 MRM3Q9HC36 420 aaKnown RBP12.49□□□□□ -0.41
FN1-201ENST00000323926 DKK3Q9UBP4 350 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 ZNF490Q9ULM2 529 aaPredicted RBP12.49□□□□□ -0.41
FN1-201ENST00000323926 ISM1B1AKI9 464 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 FSCN2O14926 492 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 GRK6P43250 576 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 TXNL4AP83876 142 aaKnown RBP12.49□□□□□ -0.41
FN1-201ENST00000323926 LIPEQ05469 1076 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 PACRGLQ8N7B6 248 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 DNAJB14Q8TBM8 379 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 EPYCQ99645 322 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 CCM2Q9BSQ5 444 aa12.49□□□□□ -0.41
FN1-201ENST00000323926 BTAF1O14981 1849 aa12.48□□□□□ -0.41
FN1-201ENST00000323926 ABHD14A-ACY1A0A1B0GW23 586 aa12.48□□□□□ -0.41
FN1-201ENST00000323926 TM7SF2O76062 418 aa12.48□□□□□ -0.41
FN1-201ENST00000323926 KCNA5P22460 613 aa12.48□□□□□ -0.41
FN1-201ENST00000323926 SEZ6Q53EL9 994 aa12.48□□□□□ -0.41
FN1-201ENST00000323926 C9orf64Q5T6V5 341 aa12.48□□□□□ -0.41
FN1-201ENST00000323926 PRAMEF18Q5VWM3 479 aa12.48□□□□□ -0.41
FN1-201ENST00000323926 CYP4X1Q8N118 509 aa12.48□□□□□ -0.41
FN1-201ENST00000323926 ATAD1Q8NBU5 361 aa12.48□□□□□ -0.41
FN1-201ENST00000323926 ADAM32Q8TC27 787 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms