RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 NUAK1O60285 661 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 UGT1A9O60656 530 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 UGT1A6P19224 532 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 UGT1A1P22309 533 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 UGT1A4P22310 534 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 UGT1A3P35503 534 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 PCDH1Q08174 1060 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 WSCD1Q658N2 575 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 CMC1Q7Z7K0 106 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 SLC9A9Q8IVB4 645 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 PHC3Q8NDX5 983 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 UGT1A7Q9HAW7 530 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 UGT1A10Q9HAW8 530 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 UGT1A8Q9HAW9 530 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 PLK2Q9NYY3 685 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 ZNF3P17036 446 aa16.71■□□□□ 0.26
SMCHD1-201ENST00000320876 SLC30A6Q6NXT4 461 aa16.71■□□□□ 0.26
SMCHD1-201ENST00000320876 PAMR1Q6UXH9 720 aa16.71■□□□□ 0.26
SMCHD1-201ENST00000320876 ZNF517Q6ZMY9 492 aaPredicted RBP16.71■□□□□ 0.26
SMCHD1-201ENST00000320876 LRTOMTQ8WZ04 291 aa16.71■□□□□ 0.26
SMCHD1-201ENST00000320876 ZNF285Q96NJ3 590 aa16.71■□□□□ 0.26
SMCHD1-201ENST00000320876 C22orf31O95567 290 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 DBIP07108 87 aaKnown RBP16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 SLC6A4P31645 630 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 ADAM15Q13444 863 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 VMACQ2NL98 169 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 DGLUCYQ7Z3D6 616 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 COPS8Q99627 209 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 ERVK-5Q9HDB9 667 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 MIOSQ9NXC5 875 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 ASF1AQ9Y294 204 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 GTF2H2Q13888 395 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 GTF2H2CQ6P1K8 395 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 KLHDC10Q6PID8 442 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 AP1S3Q96PC3 154 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 GBA3Q9H227 469 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 RPP40O75818 363 aaKnown RBP16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 CDKL4Q5MAI5 379 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 RAP1GAP2Q684P5 730 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 SLC38A4Q969I6 547 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 TIFAQ96CG3 184 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 KCTD7Q96MP8 289 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 ZNF471Q9BX82 626 aaPredicted RBP16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 ASAH2Q9NR71 780 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 A0A1W2PPM1 405 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 UGT2B4P06133 528 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 AKT2P31751 481 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 IQCCQ4KMZ1 466 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 NXPE2Q96DL1 559 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 TCF7L1Q9HCS4 588 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 HNRNPH3P31942 346 aaKnown RBP16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 FAM46CQ5VWP2 391 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 ADGRD1Q6QNK2 874 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 RGS17Q9UGC6 210 aaPredicted RBP16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 CALCAP01258 141 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 DEFB128Q7Z7B8 93 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 LNX1Q8TBB1 728 aaPredicted RBP16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 NKD1Q969G9 470 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 EML1O00423 815 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 GTF2BQ00403 316 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 IL17RBQ9NRM6 502 aa16.7■□□□□ 0.26
SMCHD1-201ENST00000320876 PRDM12Q9H4Q4 367 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 C5orf60A6NFR6 353 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 ACADVLP49748 655 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 OGFRL1Q5TC84 451 aaPredicted RBP16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 CUEDC1Q9NWM3 386 aaPredicted RBP16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 UCKL1Q9NWZ5 548 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 TAS2R1Q9NYW7 299 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 PHF24Q9UPV7 400 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 KCNIP3Q9Y2W7 256 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 TULP2O00295 520 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 FEM1AQ9BSK4 669 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 PRRG4Q9BZD6 226 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 AGO3Q9H9G7 860 aaKnown RBP16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 PCDHGC3Q9UN70 934 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 STK16O75716 305 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 IL1BP01584 269 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 HOXC12P31275 282 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 PARP15Q460N3 678 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 BRMS1LQ5PSV4 323 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 HECTD2Q5U5R9 776 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 DNAJB4Q9UDY4 337 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 LGALS13Q9UHV8 139 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 NRCAMQ92823 1304 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 NOTOA8MTQ0 251 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 CACNB4O00305 520 aaPredicted RBP16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 RAP2AP10114 183 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 COL6A1P12109 1028 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 KLRK1P26718 216 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 FOXR2Q6PJQ5 311 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 SMARCD3Q6STE5 483 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 SAMD7Q7Z3H4 446 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 SYVN1Q86TM6 617 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 ZBTB2Q8N680 514 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 GLB1L3Q8NCI6 653 aaPredicted RBP16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 KCTD5Q9NXV2 234 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 MAGEB17A8MXT2 336 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 ERP29P30040 261 aaKnown RBP16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 CDK18Q07002 472 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 WSCD2Q2TBF2 565 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms