RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 KRT222Q8N1A0 295 aa13.4□□□□□ -0.26
PRPF18-201ENST00000320054 OXR1Q8N573 874 aa13.4□□□□□ -0.26
PRPF18-201ENST00000320054 INPP5DQ92835 1189 aa13.4□□□□□ -0.26
PRPF18-201ENST00000320054 ALKBH8Q96BT7 664 aaKnown RBP13.4□□□□□ -0.26
PRPF18-201ENST00000320054 ZBTB9Q96C00 473 aa13.4□□□□□ -0.26
PRPF18-201ENST00000320054 GPR21Q99679 349 aa13.4□□□□□ -0.26
PRPF18-201ENST00000320054 CCM2Q9BSQ5 444 aa13.4□□□□□ -0.26
PRPF18-201ENST00000320054 C1QTNF1Q9BXJ1 281 aa13.4□□□□□ -0.26
PRPF18-201ENST00000320054 SYTL2Q9HCH5 934 aa13.4□□□□□ -0.26
PRPF18-201ENST00000320054 SSU72Q9NP77 194 aaKnown RBP13.4□□□□□ -0.26
PRPF18-201ENST00000320054 AASDHPPTQ9NRN7 309 aa13.4□□□□□ -0.26
PRPF18-201ENST00000320054 MKS1Q9NXB0 559 aa13.4□□□□□ -0.26
PRPF18-201ENST00000320054 TRMT6Q9UJA5 497 aaKnown RBP13.4□□□□□ -0.26
PRPF18-201ENST00000320054 NOVA2Q9UNW9 492 aaKnown RBP13.4□□□□□ -0.26
PRPF18-201ENST00000320054 ANKRD6Q9Y2G4 727 aa13.4□□□□□ -0.26
PRPF18-201ENST00000320054 CUL9Q8IWT3 2517 aa13.4□□□□□ -0.26
PRPF18-201ENST00000320054 TMEM131Q92545 1883 aa13.4□□□□□ -0.26
PRPF18-201ENST00000320054 A0A087X1B8 175 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 A0A096LPK6 155 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 SPTY2D1-AS1A0A0U1RR47 76 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 C17orf113A0A1B0GUU1 675 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 IQCF5A8MTL0 148 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 FOXO6A8MYZ6 492 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 KMOO15229 486 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 GRID2O43424 1007 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 KCNJ13O60928 360 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 TRIM16O95361 564 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 C2P06681 752 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 THEGLP0DJG4 465 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 PYGBP11216 843 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 COL6A2P12110 1019 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 MAOBP27338 520 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 AOAHP28039 575 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 DPP6P42658 865 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 TTLL9Q3SXZ7 439 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 PLEKHS1Q5SXH7 462 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 TPRG1LQ5T0D9 272 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 ENPP7Q6UWV6 458 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 RAPH1Q70E73 1250 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 CEP68Q76N32 757 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 C11orf96Q7Z7L8 435 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 TRAPPC5Q8IUR0 188 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 ZNF547Q8IVP9 402 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 RGL4Q8IZJ4 473 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 LKAAEAR1Q8TD35 194 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 CD200R1Q8TD46 325 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 TIMM29Q9BSF4 260 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 MIR1-1HGQ9H1L0 117 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 GPAMQ9HCL2 828 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 FGF22Q9HCT0 170 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 GALPQ9UBC7 116 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 TLK1Q9UKI8 766 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 ACOT9Q9Y305 439 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 SLCO1B1Q9Y6L6 691 aa13.39□□□□□ -0.27
PRPF18-201ENST00000320054 ANKRD12Q6UB98 2062 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 PRSS38A1L453 326 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 PRR5-ARHGAP8B1AHC4 643 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 EIF3FO00303 357 aaPredicted RBP13.38□□□□□ -0.27
PRPF18-201ENST00000320054 VILLO15195 856 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 BCAT2O15382 392 aaPredicted RBP13.38□□□□□ -0.27
PRPF18-201ENST00000320054 PHGDHO43175 533 aaKnown RBP13.38□□□□□ -0.27
PRPF18-201ENST00000320054 FUCA1P04066 466 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 WNT1P04628 370 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 GSTA1P08263 222 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 CBSLP0DN79 551 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 ZNF37AP17032 561 aaPredicted RBP13.38□□□□□ -0.27
PRPF18-201ENST00000320054 KRT4P19013 534 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 CCR7P32248 378 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 CBSP35520 551 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 DHPSP49366 369 aaPredicted RBP13.38□□□□□ -0.27
PRPF18-201ENST00000320054 AFF3P51826 1226 aaKnown RBP13.38□□□□□ -0.27
PRPF18-201ENST00000320054 MAGOHP61326 146 aaKnown RBP13.38□□□□□ -0.27
PRPF18-201ENST00000320054 GBX1Q14549 363 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 ZNF658BQ4V348 819 aaPredicted RBP13.38□□□□□ -0.27
PRPF18-201ENST00000320054 PYCR3Q53H96 274 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 PEAR1Q5VY43 1037 aaPredicted RBP13.38□□□□□ -0.27
PRPF18-201ENST00000320054 PAQR3Q6TCH7 311 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 ARMCX6Q7L4S7 300 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 OTOAQ7RTW8 1153 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 CLEC14AQ86T13 490 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 PIM3Q86V86 326 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 GALNT13Q8IUC8 556 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 SLC22A18ASQ8N1D0 253 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 NKAPQ8N5F7 415 aaKnown RBP13.38□□□□□ -0.27
PRPF18-201ENST00000320054 ZBTB2Q8N680 514 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 SIDT2Q8NBJ9 832 aaKnown RBP13.38□□□□□ -0.27
PRPF18-201ENST00000320054 OR2L2Q8NH16 312 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 GIMAP7Q8NHV1 300 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 HM13Q8TCT9 377 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 NAT14Q8WUY8 206 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 ASZ1Q8WWH4 475 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 OR1E3Q8WZA6 343 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 SKA1Q96BD8 255 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 PDLIM5Q96HC4 596 aaKnown RBP13.38□□□□□ -0.27
PRPF18-201ENST00000320054 UBXN10Q96LJ8 280 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 SMC6Q96SB8 1091 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 VPS11Q9H270 941 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 KLQ9UEF7 1012 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 SUSD2Q9UGT4 822 aa13.38□□□□□ -0.27
PRPF18-201ENST00000320054 DCDC2Q9UHG0 476 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms