RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PEX11AO75192 247 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 ENTPD5O75356 428 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 GPC4O75487 556 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 S100BP04271 92 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-201ENST00000309469 HYAL1Q12794 435 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 CYLC2Q14093 348 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-201ENST00000309469 C9orf64Q5T6V5 341 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 ANKRD54Q6NXT1 300 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 ERAP2Q6P179 960 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 ULK2Q8IYT8 1036 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 OR56A4Q8NGH8 313 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 CLPTM1LQ96KA5 538 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 C3orf30Q96M34 536 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 NFKBIL1Q9UBC1 381 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-201ENST00000309469 ADAMTS6Q9UKP5 1117 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 OARD1Q9Y530 152 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 ASB1Q9Y576 335 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 TNPO3Q9Y5L0 923 aaKnown RBP20.95■□□□□ 0.94
ATG4D-201ENST00000309469 EDDM13A0A1B0GTR0 161 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 CBSLP0DN79 551 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 HLA-EP13747 358 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 ITGAXP20702 1163 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 CBSP35520 551 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 MMP12P39900 470 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 PCBP2Q15366 365 aaKnown RBP eCLIP20.94■□□□□ 0.94
ATG4D-201ENST00000309469 TECPR1Q7Z6L1 1165 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 SYVN1Q86TM6 617 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 TRAM1L1Q8N609 369 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 TRANK1O15050 2925 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 A0A088AWK7 358 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 ATP6AP2A0A1C7CYW4 349 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 PIP5K1BO14986 540 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 CRCPO75575 148 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 ATP6AP2O75787 350 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 ESRRBO95718 433 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 ATP1B2P14415 290 aaPredicted RBP20.94■□□□□ 0.94
ATG4D-201ENST00000309469 AKT1P31749 480 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 CCR7P32248 378 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 FCHO2Q0JRZ9 810 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 KPNB1Q14974 876 aaKnown RBP20.94■□□□□ 0.94
ATG4D-201ENST00000309469 RBBP7Q16576 425 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 SFTPA1Q8IWL2 248 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 CPA6Q8N4T0 437 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 TERB1Q8NA31 727 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 PDPRQ8NCN5 879 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 TMIEQ8NEW7 156 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 WDR60Q8WVS4 1066 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 OR8D1Q8WZ84 308 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 DCUN1D1Q96GG9 259 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 RIOK2Q9BVS4 552 aaKnown RBP20.94■□□□□ 0.94
ATG4D-201ENST00000309469 RNPEPL1Q9HAU8 725 aa20.94■□□□□ 0.94
ATG4D-201ENST00000309469 MBD1Q9UIS9 605 aaPredicted RBP20.94■□□□□ 0.94
ATG4D-201ENST00000309469 PRDX3P30048 256 aaKnown RBP20.93■□□□□ 0.94
ATG4D-201ENST00000309469 RUNX3Q13761 415 aa20.93■□□□□ 0.94
ATG4D-201ENST00000309469 SQLEQ14534 574 aa20.93■□□□□ 0.94
ATG4D-201ENST00000309469 ZNF234Q14588 700 aa20.93■□□□□ 0.94
ATG4D-201ENST00000309469 HENMT1Q5T8I9 393 aaKnown RBP20.93■□□□□ 0.94
ATG4D-201ENST00000309469 NAIF1Q69YI7 327 aaPredicted RBP20.93■□□□□ 0.94
ATG4D-201ENST00000309469 LIPIQ6XZB0 460 aa20.93■□□□□ 0.94
ATG4D-201ENST00000309469 DET1Q7L5Y6 550 aa20.93■□□□□ 0.94
ATG4D-201ENST00000309469 TUBB1Q9H4B7 451 aa20.93■□□□□ 0.94
ATG4D-201ENST00000309469 AKTIPQ9H8T0 292 aa20.93■□□□□ 0.94
ATG4D-201ENST00000309469 ZNF225Q9UK10 706 aa20.93■□□□□ 0.94
ATG4D-201ENST00000309469 PPM1HQ9ULR3 514 aa20.93■□□□□ 0.94
ATG4D-201ENST00000309469 OPRD1P41143 372 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 GRIN2CQ14957 1233 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 C18orf21Q32NC0 220 aaPredicted RBP20.92■□□□□ 0.94
ATG4D-201ENST00000309469 DDIASQ8IXT1 998 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 ZSCAN5AQ9BUG6 496 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 PLA2G2FQ9BZM2 168 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 TMEM245Q9H330 911 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 SLC7A8Q9UHI5 535 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 PTBP2Q9UKA9 531 aaKnown RBP20.92■□□□□ 0.94
ATG4D-201ENST00000309469 PRRC2BQ5JSZ5 2229 aaKnown RBP20.92■□□□□ 0.94
ATG4D-201ENST00000309469 TBC1D3BA6NDS4 549 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 CFAP99D6REC4 459 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 AIM2O14862 343 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 CIB2O75838 187 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 GUCA1CO95843 209 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 ELFN1P0C7U0 828 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 UROSP10746 265 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 ENO3P13929 434 aaPredicted RBP20.92■□□□□ 0.94
ATG4D-201ENST00000309469 AOAHP28039 575 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 METAP1P53582 386 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 GRM2Q14416 872 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 ZRSR2Q15696 482 aaKnown RBP20.92■□□□□ 0.94
ATG4D-201ENST00000309469 PHKG1Q16816 387 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 ZNF284Q2VY69 593 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 KHDC1Q4VXA5 237 aaKnown RBP20.92■□□□□ 0.94
ATG4D-201ENST00000309469 GPRIN3Q6ZVF9 776 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 NET1Q7Z628 596 aaPredicted RBP20.92■□□□□ 0.94
ATG4D-201ENST00000309469 YAF2Q8IY57 180 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 DEFB107AQ8IZN7 70 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 PIP4K2CQ8TBX8 421 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 DLG3Q92796 817 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 ZNF382Q96SR6 550 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 NUSAP1Q9BXS6 441 aaKnown RBP20.92■□□□□ 0.94
ATG4D-201ENST00000309469 NSUN3Q9H649 340 aaKnown RBP20.92■□□□□ 0.94
ATG4D-201ENST00000309469 ITM2BQ9Y287 266 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 TIMM22Q9Y584 194 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms