RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 TCF12Q99081 682 aa20.52■□□□□ 0.88
SH3RF3-201ENST00000309415 CARS2Q9HA77 564 aaKnown RBP20.52■□□□□ 0.88
SH3RF3-201ENST00000309415 PPIDQ08752 370 aaKnown RBP20.52■□□□□ 0.88
SH3RF3-201ENST00000309415 ISLR2Q6UXK2 745 aa20.52■□□□□ 0.88
SH3RF3-201ENST00000309415 ALYREFQ86V81 257 aaKnown RBP20.52■□□□□ 0.88
SH3RF3-201ENST00000309415 C4orf32Q8N8J7 132 aa20.52■□□□□ 0.88
SH3RF3-201ENST00000309415 SIPA1Q96FS4 1042 aa20.52■□□□□ 0.88
SH3RF3-201ENST00000309415 NPAS2Q99743 824 aa20.52■□□□□ 0.88
SH3RF3-201ENST00000309415 A0A1W2PPM1 405 aa20.52■□□□□ 0.88
SH3RF3-201ENST00000309415 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.52■□□□□ 0.88
SH3RF3-201ENST00000309415 CRHR1P34998 444 aa20.52■□□□□ 0.88
SH3RF3-201ENST00000309415 ZNF567Q8N184 647 aa20.52■□□□□ 0.88
SH3RF3-201ENST00000309415 TIMM22Q9Y584 194 aa20.52■□□□□ 0.88
SH3RF3-201ENST00000309415 MLLT3P42568 568 aaPredicted RBP20.52■□□□□ 0.87
SH3RF3-201ENST00000309415 RFTN1Q14699 578 aaPredicted RBP20.52■□□□□ 0.87
SH3RF3-201ENST00000309415 SMU1Q2TAY7 513 aa20.52■□□□□ 0.87
SH3RF3-201ENST00000309415 LRRN4CLQ8ND94 238 aa20.52■□□□□ 0.87
SH3RF3-201ENST00000309415 RNF31Q96EP0 1072 aa20.52■□□□□ 0.87
SH3RF3-201ENST00000309415 C12orf42Q96LP6 360 aa20.52■□□□□ 0.87
SH3RF3-201ENST00000309415 NOL6Q9H6R4 1146 aaKnown RBP20.52■□□□□ 0.87
SH3RF3-201ENST00000309415 ARHGEF28Q8N1W1 1705 aaKnown RBP20.52■□□□□ 0.87
SH3RF3-201ENST00000309415 RCCD1A6NED2 376 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 CCL22O00626 93 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 SNX3O60493 162 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 PTGER3P43115 390 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 ZCCHC12Q6PEW1 402 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 TSEN15Q8WW01 171 aaKnown RBP20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 POLR3BQ9NW08 1133 aaPredicted RBP20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 IRAK3Q9Y616 596 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 TP73O15350 636 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 TLX3O43711 291 aaPredicted RBP20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 CD247P20963 164 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 ALDH4A1P30038 563 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 ZNF846Q147U1 533 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 MED22Q15528 200 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 TTC27Q6P3X3 843 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 TMPRSS11AQ6ZMR5 421 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 RANBP3LQ86VV4 465 aaPredicted RBP20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 PRODHO43272 600 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 SMPDL3BQ92485 455 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 FGFBP2Q9BYJ0 223 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 NRP2O60462 931 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 NUDT17P0C025 328 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 RYKP34925 604 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 RFC2P35250 354 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 HNRNPDQ14103 355 aaKnown RBP20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 SLC10A6Q3KNW5 377 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 ARSIQ5FYB1 569 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 PHF19Q5T6S3 580 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 TLR6Q9Y2C9 796 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 WFS1O76024 890 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 TGDSO95455 350 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 MT-CYBP00156 380 aaPredicted RBP20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 DBTP11182 482 aaKnown RBP20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 CCND3P30281 292 aaPredicted RBP20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 TGFBR2P37173 567 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 CLCQ05315 142 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 HEPACAMQ14CZ8 416 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 UAP1L1Q3KQV9 507 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 GK5Q6ZS86 529 aa20.51■□□□□ 0.87
SH3RF3-201ENST00000309415 RIIAD1A6NNX1 92 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 WNT9AO14904 365 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 PGRMC2O15173 223 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 ITGADQ13349 1161 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 PIK3R6Q5UE93 754 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 SAMD14Q8IZD0 417 aaPredicted RBP20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 GJD3Q8N144 294 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 SSNA1O43805 119 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 ESR1P03372 595 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 TTKP33981 857 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 ZNF662Q6ZS27 426 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 CTU1Q7Z7A3 348 aaKnown RBP20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 SLC22A18Q96BI1 424 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 CRELD1Q96HD1 420 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 TLR9Q9NR96 1032 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 PRPF19Q9UMS4 504 aaKnown RBP20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 IRAK2O43187 625 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 CTSKP43235 329 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 MBLAC2Q68D91 279 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 MMAAQ8IVH4 418 aaKnown RBP20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 ZNF514Q96K75 400 aaPredicted RBP20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 CDC14AQ9UNH5 594 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 Q9Y3F1 56 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 A0A0U1RQJ8 604 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 TCEA3O75764 348 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 CAPGP40121 348 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 CDKN2BP42772 138 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 CHN2P52757 468 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 PCDH1Q08174 1060 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 DSN1Q9H410 356 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 CCNB1IP1Q9NPC3 277 aa20.5■□□□□ 0.87
SH3RF3-201ENST00000309415 NDUFS1P28331 727 aa20.49■□□□□ 0.87
SH3RF3-201ENST00000309415 MYBPC3Q14896 1274 aa20.49■□□□□ 0.87
SH3RF3-201ENST00000309415 IL23RQ5VWK5 629 aa20.49■□□□□ 0.87
SH3RF3-201ENST00000309415 GDPD4Q6W3E5 623 aa20.49■□□□□ 0.87
SH3RF3-201ENST00000309415 AMIGO2Q86SJ2 522 aa20.49■□□□□ 0.87
SH3RF3-201ENST00000309415 SFRP1Q8N474 314 aa20.49■□□□□ 0.87
SH3RF3-201ENST00000309415 SLC44A1Q8WWI5 657 aa20.49■□□□□ 0.87
SH3RF3-201ENST00000309415 ANKHQ9HCJ1 492 aa20.49■□□□□ 0.87
SH3RF3-201ENST00000309415 MROH1Q8NDA8 1641 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms