RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 NFE2L1Q14494 772 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 ZNF658BQ4V348 819 aaPredicted RBP19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 AMZ2Q86W34 360 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 AVL9Q8NBF6 648 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 GPR150Q8NGU9 434 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 NCSTNQ92542 709 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 ART4Q93070 314 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 SGF29Q96ES7 293 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 PPP1R2P1Q96PQ5 205 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 TAAR9Q96RI9 348 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 CCNL2Q96S94 520 aaPredicted RBP19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 STN1Q9H668 368 aaKnown RBP19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 ASB8Q9H765 288 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 SIDT1Q9NXL6 827 aaKnown RBP19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 FEZ2Q9UHY8 353 aaPredicted RBP19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 IGLV3-16A0A075B6K0 115 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 TRBV5-4A0A0C4DH59 114 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 H7C0S8 307 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 LIASO43766 372 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 AP2A1O95782 977 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 ANKRD34CP0C6C1 535 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 CD82P27701 267 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 CSTF2P33240 577 aaKnown RBP eCLIP19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 CCZ1BP86790 482 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 CCZ1P86791 482 aaPredicted RBP19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 GTF2H3Q13889 308 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 GPR18Q14330 331 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 BCL7AQ4VC05 210 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 MEI1Q5TIA1 1274 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 METRNLQ641Q3 311 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 ARHGEF18Q6ZSZ5 1173 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 SLC13A5Q86YT5 568 aaPredicted RBP19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 LSM14AQ8ND56 463 aaKnown RBP19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 RSC1A1Q92681 617 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 AHCYL2Q96HN2 611 aaKnown RBP19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 DNAJC1Q96KC8 554 aaKnown RBP19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 LINC00615Q96LM1 132 aaPredicted RBP19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 DDA1Q9BW61 102 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 TSGA10Q9BZW7 698 aa19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 ZCCHC2Q9C0B9 1178 aaKnown RBP19.44■□□□□ 0.7
PDZRN3-202ENST00000308537 EFCAB7A8K855 629 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 A8MU76 341 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 CRTAMO95727 393 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 VIPP01282 170 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 PRB1P04280 392 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 PRSS56P0CW18 603 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 TPH1P17752 444 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 CDKN1CP49918 316 aaPredicted RBP19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 RPE65Q16518 533 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 SNAP47Q5SQN1 464 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 FNBP1LQ5T0N5 605 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 ANKS6Q68DC2 871 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 NXPE1Q8N323 547 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 LILRA3Q8N6C8 439 aaPredicted RBP19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 GLIS1Q8NBF1 620 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 TTC25Q96NG3 672 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 LRRC40Q9H9A6 602 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 APMAPQ9HDC9 416 aa19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 PIH1D1Q9NWS0 290 aaKnown RBP19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 AKAP7Q9P0M2 348 aaPredicted RBP19.43■□□□□ 0.7
PDZRN3-202ENST00000308537 GCN1Q92616 2671 aaKnown RBP19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 ERVH48-1M5A8F1 160 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 TK2O00142 265 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 KRT86O43790 486 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 UBXN7O94888 489 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 TYRP1P17643 537 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 MAPK9P45984 424 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 CAPZBP47756 277 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 LEPRP48357 1165 aaKnown RBP19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 TMPRSS15P98073 1019 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 MC2RQ01718 297 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 LONRF2Q1L5Z9 754 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 P3H1Q32P28 736 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 KIAA1614Q5VZ46 1190 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 CCDC81Q6ZN84 652 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 DET1Q7L5Y6 550 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 SNX20Q7Z614 316 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 PRUNE1Q86TP1 453 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 VASH2Q86V25 355 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 LRRC8AQ8IWT6 810 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 UBE2Q2Q8WVN8 375 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 SLC39A7Q92504 469 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 NKD1Q969G9 470 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 ZNF514Q96K75 400 aaPredicted RBP19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 C9orf72Q96LT7 481 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 FAM96AQ9H5X1 160 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 NLE1Q9NVX2 485 aaPredicted RBP19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 PSMD13Q9UNM6 376 aa19.42■□□□□ 0.7
PDZRN3-202ENST00000308537 MGAT4DA6NG13 374 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 MROH6A6NGR9 719 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 VCLP18206 1134 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 MSH3P20585 1137 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 GRIA1P42261 906 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 PRLHRP49683 370 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 PPP1CAP62136 330 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 PDE1BQ01064 536 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 RHDQ02161 417 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 COL9A2Q14055 689 aaPredicted RBP19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 PLXDC1Q8IUK5 500 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 RBM12BQ8IXT5 1001 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms