RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 CLYBLQ8N0X4 340 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 CHCHD4Q8N4Q1 142 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 DDHD1Q8NEL9 900 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 ZNF483Q8TF39 744 aaPredicted RBP11.84□□□□□ -0.51
TPM3-202ENST00000302206 FAM136AQ96C01 138 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 CMTM5Q96DZ9 223 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 MOCOSQ96EN8 888 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 OR52B2Q96RD2 323 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 TBC1D10AQ9BXI6 508 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 C1orf21Q9H246 121 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 MTG2Q9H4K7 406 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 MEAF6Q9HAF1 191 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 SARS2Q9NP81 518 aaKnown RBP11.84□□□□□ -0.51
TPM3-202ENST00000302206 CLEC1BQ9P126 229 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 ARMCX1Q9P291 453 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 THAP10Q9P2Z0 257 aaPredicted RBP11.84□□□□□ -0.51
TPM3-202ENST00000302206 TMPRSS11EQ9UL52 423 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 STK38LQ9Y2H1 464 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 TRAF6Q9Y4K3 522 aa11.84□□□□□ -0.51
TPM3-202ENST00000302206 TNPO3Q9Y5L0 923 aaKnown RBP11.84□□□□□ -0.51
TPM3-202ENST00000302206 DENND4AQ7Z401 1863 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 IQCF5A8MTL0 148 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 PRR5-ARHGAP8B1AHC4 643 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 SDHDO14521 159 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 UBFD1O14562 309 aaKnown RBP11.83□□□□□ -0.52
TPM3-202ENST00000302206 NPC1O15118 1278 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 RAD51BO15315 384 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 SNX2O60749 519 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 CDK14O94921 469 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 MLYCDO95822 493 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 ARHGAP8P85298 464 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 B4GALNT1Q00973 533 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 SEMG2Q02383 582 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 CREB5Q02930 508 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 MESP2Q0VG99 397 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 LCP2Q13094 533 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 ENPP2Q13822 863 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 UBAP2LQ14157 1087 aaKnown RBP11.83□□□□□ -0.52
TPM3-202ENST00000302206 HERC3Q15034 1050 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 PCBP2Q15366 365 aaKnown RBP eCLIP11.83□□□□□ -0.52
TPM3-202ENST00000302206 ZNF284Q2VY69 593 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 LSM12Q3MHD2 195 aaKnown RBP11.83□□□□□ -0.52
TPM3-202ENST00000302206 ITPRIPL2Q3MIP1 535 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 TMEM52BQ4KMG9 183 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 DNAL1Q4LDG9 190 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 LDLRAP1Q5SW96 308 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 HENMT1Q5T8I9 393 aaKnown RBP11.83□□□□□ -0.52
TPM3-202ENST00000302206 CYB5D1Q6P9G0 228 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 TTC23LQ6PF05 361 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 LIPIQ6XZB0 460 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 MTSS1LQ765P7 747 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 EFL1Q7Z2Z2 1120 aaKnown RBP11.83□□□□□ -0.52
TPM3-202ENST00000302206 NLRP8Q86W28 1048 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 TMPRSS6Q8IU80 811 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 ADHFE1Q8IWW8 467 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 KIF2BQ8N4N8 673 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 PDPRQ8NCN5 879 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 PRSS33Q8NF86 280 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 CEP70Q8NHQ1 597 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 PIP4K2CQ8TBX8 421 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 AGR3Q8TD06 166 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 LKAAEAR1Q8TD35 194 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 SUSD6Q92537 303 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 EXT2Q93063 718 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 DCUN1D1Q96GG9 259 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 COQ10AQ96MF6 247 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 FAM129BQ96TA1 746 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 SPATA16Q9BXB7 569 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 FAM126AQ9BYI3 521 aaPredicted RBP11.83□□□□□ -0.52
TPM3-202ENST00000302206 NUF2Q9BZD4 464 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 PLA2G2FQ9BZM2 168 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 MMADHCQ9H3L0 296 aaPredicted RBP11.83□□□□□ -0.52
TPM3-202ENST00000302206 ZNF385DQ9H6B1 395 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 RDH14Q9HBH5 336 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 ACSS2Q9NR19 701 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.83□□□□□ -0.52
TPM3-202ENST00000302206 OARD1Q9Y530 152 aa11.83□□□□□ -0.52
TPM3-202ENST00000302206 TBC1D3BA6NDS4 549 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 C19orf67A6NJJ6 358 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 C1QTNF3-AMACRE9PGA6 284 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 KPNA3O00505 521 aaPredicted RBP11.82□□□□□ -0.52
TPM3-202ENST00000302206 AREL1O15033 823 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 GYG2O15488 501 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 GFRA3O60609 400 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 WFS1O76024 890 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 KAT7O95251 611 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 TRIM16O95361 564 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 S100BP04271 92 aaPredicted RBP11.82□□□□□ -0.52
TPM3-202ENST00000302206 APODP05090 189 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 ENO1P06733 434 aaKnown RBP11.82□□□□□ -0.52
TPM3-202ENST00000302206 MPC1LP0DKB6 136 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 ATP1B2P14415 290 aaPredicted RBP11.82□□□□□ -0.52
TPM3-202ENST00000302206 NCF2P19878 526 aaPredicted RBP11.82□□□□□ -0.52
TPM3-202ENST00000302206 AOAHP28039 575 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 EEF1DP29692 281 aaKnown RBP11.82□□□□□ -0.52
TPM3-202ENST00000302206 TNFRSF4P43489 277 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 HK3P52790 923 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 CLCQ05315 142 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 BTKQ06187 659 aa11.82□□□□□ -0.52
TPM3-202ENST00000302206 COL19A1Q14993 1142 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms